Stenomitos frigidus: RBJ76_11980
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Entry
RBJ76_11980 CDS
T10829
Name
(GenBank) FAD-binding domain-containing protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sfri Stenomitos frigidus
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfri03400
]
RBJ76_11980
Enzymes [BR:
sfri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RBJ76_11980
DNA repair and recombination proteins [BR:
sfri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RBJ76_11980
Prokaryotic type
RBJ76_11980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XHX80611
LinkDB
All DBs
Position
complement(2547770..2549410)
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AA seq
546 aa
AA seq
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MNRTIVWFRRDLRIADHAPLYRAALRGEVIPVFVFDRALLHHPETGSARVAFMLECLRSL
DQDLRDRGGRLILRSGDPVDILPQLIRETQADGIYAHIDFERIYGRVRDARLNKALAQEN
LKIRWFEPLATTDELMPYPAYRDLWFDDMNAAMVPTPGHVYVPADVMSEPLPTLTDVGHL
PDAKPIPPAGTQAARKMLQEFLTEKTERYYWQLSYPSAEATTGLSPHIKFGAISVRECYQ
MAQQLKASPDMRVQRSRKQLIARLRWGNGFAQRFRYLPQLELRSLYNIFDEDGWAFDETL
YHAWQQGETGFPIVDAAARCLQATGGWKELNFRIRALYASFLSNLLGMDWRYGALHFMRH
LIDGDCPIDHYQWAMQSGVTHCVDKTWTRIYNPGQVAVDRCDPDGIFIKRWLPELKHLPP
ASLGSPLPMQSYPTPILDYKKARKQRVQQLEQQRQQFLGLENVVPHLSRLPANLLPFGAE
RFDTEVGWATTSDHDLFPPPLDLDAIDPHQAKALRTWFVAHVDVKPRKASRRKPEPEPGD
LQLSLL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcacgatcgtctggtttcgtcgggatttacgtatcgcggatcatgcgccacta
tatcgggcggcgttgcggggtgaggtcattcccgtgtttgtgttcgatcgcgccctgcta
catcatcccgaaacaggttcagcgcgggttgcgtttatgctggagtgcttgcgatcgctg
gatcaagatttgcgcgatcgcggtggacgcttgattttgcgatcgggtgatccagtagac
atactaccgcaactcattcgcgaaacccaggcggacgggatctatgctcatatcgacttt
gagcggatctatggacgggtgcgagatgcccgcttaaacaaagctctagcgcaagaaaac
ctcaaaattcgctggtttgagccgcttgctacaacggatgaacttatgccctatcccgct
taccgggacttgtggtttgacgacatgaacgcggctatggtgcccacgcctggtcacgtc
tatgtgccagccgatgtcatgagcgaacccctaccgacgcttaccgacgtaggtcatctg
cccgatgccaagccaattccgcctgctggaacccaagcagcccgcaaaatgttgcaggaa
tttctaactgagaaaacggaacgctactactggcagctctcttatcccagcgccgaagcg
acaacagggctaagtccacacatcaaatttggtgcgatttccgtgcgggaatgctaccag
atggcgcagcagctcaaagcttcgcctgatatgcgggtgcagcggagtcgtaagcagttg
atcgcccggttgcgttggggcaatgggtttgcccaacggtttcgctacctgccgcagtta
gagttgcgatcactgtacaacatttttgatgaggacggctgggcgtttgacgaaacgctc
taccacgcatggcagcagggcgaaacgggctttccgatcgtcgatgcagcagcacggtgc
ctccaggcaactggcggctggaaagaactcaattttcgcatccgtgccctctacgccagc
tttttgagcaatctgctgggcatggactggcgttacggcgcactgcactttatgcgtcac
ttgattgatggtgattgcccgatcgaccattatcagtgggcaatgcaatcaggtgtcact
cattgcgttgataaaacctggacgcgcatttataaccctggtcaagtggcggtcgatcgc
tgcgatccagatggcattttcatcaagcgctggctaccagaactgaagcacctgccgcct
gcaagtctcggctcaccgctgcctatgcagagctatcctactcccatcctcgattacaaa
aaggctcgaaagcaacgagtccagcagctagagcaacagcgtcaacaatttttggggctg
gaaaacgttgtaccacacctatcgcgcttgccagccaatcttctgccctttggcgcagaa
cgctttgatacagaagtaggttgggcgacgacttcggatcacgacctcttcccgccgccg
ctcgatctagatgcgatcgatccccatcaagcaaaagccctacgcacctggtttgtggcg
cacgtggacgttaaaccgcgtaaagcatcccgtcgtaaacccgaaccggaacctggcgat
cttcaactcagtttgctgtaa
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