Stenomitos frigidus: RBJ76_12515
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Entry
RBJ76_12515 CDS
T10829
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfri Stenomitos frigidus
Pathway
sfri00061
Fatty acid biosynthesis
sfri00071
Fatty acid degradation
sfri01100
Metabolic pathways
sfri01212
Fatty acid metabolism
sfri02024
Quorum sensing
sfri04146
Peroxisome
Module
sfri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RBJ76_12515
00071 Fatty acid degradation
RBJ76_12515
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RBJ76_12515
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBJ76_12515
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfri01004
]
RBJ76_12515
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfri04147
]
RBJ76_12515
Enzymes [BR:
sfri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RBJ76_12515
Lipid biosynthesis proteins [BR:
sfri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RBJ76_12515
Exosome [BR:
sfri04147
]
Exosomal proteins
Exosomal proteins of breast milk
RBJ76_12515
Exosomal proteins of breast cancer cells
RBJ76_12515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XHX80714
LinkDB
All DBs
Position
2671425..2673449
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AA seq
674 aa
AA seq
DB search
MNRSQTAPMTQQERQTLSRVIDYSQATSIPALWAIAAQRFSQNTAVYDPHAEPALKLTYA
ALYQQMQQFAIGLQALGVQPGEHIALFSDNNPRWPVADQGIMMAGAANAVRGSQADRDEL
LFILKHSDSIGLVVQDQATLTKLAQGLESLPLRFIVLLTDEMPSPVGTIKTLNFSQLMQT
GTGHTLQPVKLERDTLATLMYTSGTSGMPKGVMLSHNNLLSQVTAAASVVNPQNGRVLSI
LPIWHCYERTFEYFTFAYGCTQAYTNIRYVKKDLKDFKPNYMVAVPRLWESIYEGVQKQF
REQPASKQRLVNFFLGVSHRYIAARRLVEGVSLEKLQPSIAQRLAAAVQAAVFWLPHQLG
DRLVYKKVRAGIGGEVAFFVSGGGSIAEHLEDFFEVVGIPILGGYGLTETAPITHVRRPW
RNIRGGDGQPLRDTETRIVDLETRQPLPLLKQGLVLIREPQVMQGYYKNPEATAKAIDAD
GWFNTGDLGWVTEQGDLIITGRAKDTIVLTSGENIEPQPIEDACLRSAYIDQIMLVGQDQ
KVLGALIVPNLEALQKWAAAQNLELQLPGEEEGERREERERSQKPESTQNASPLTPYSLP
LTLNSKPVQDLVRQELNREVKNRPGYRADDRIGPFRLLLEPFTIDNGLLTQTLKIRRNVV
MERYQGMINEMFVG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttcccagaccgctcccatgactcagcaagagcgtcaaacgctcagtcgtgtg
attgattatagtcaagcaacatccattccagcgctgtgggcgatcgcggcgcaacgcttc
agccaaaacactgccgtttacgatccccatgccgagccagcgcttaagctgacctacgct
gccctttaccagcaaatgcagcagttcgcgatcgggctacaggcgttaggcgtacagccc
ggtgagcacatcgccttattctccgataacaacccccgctggcccgttgctgaccagggc
atcatgatggcaggtgccgcaaatgctgtgcgtggctctcaggcagaccgcgacgaactg
ctgtttattctgaaacacagcgacagcatcggactggtcgtgcaagaccaggcaacgtta
acaaagctggctcaaggtctggagtccctgccgctacggtttatcgtactgctgactgat
gaaatgccatcgccagtcggtacgatcaagacgctgaatttttcgcaattgatgcagacg
ggcacaggtcatacccttcagcctgtaaagctagaacgtgacacgctggcaaccttgatg
tatacctctggcacctctggaatgccaaaaggggtcatgctgagccacaacaatttactg
tctcaagtgacagcagcagcctcggtcgtcaatccccaaaatgggcgtgtgttgagcatt
ctaccgatctggcactgctacgagcgcacgtttgaatactttacctttgcctatggctgt
acgcaggcatacaccaacattcgctacgtcaagaaagacctaaaggatttcaagccaaat
tatatggtggcagtgccccggctgtgggagtccatttacgagggcgtgcaaaagcagttt
cgagagcaacctgccagtaagcagcggttggtgaacttctttttgggcgtgagccatcgt
tacattgcggcacgtcggctggtggagggtgtgagtttggaaaagctccagccatcgatc
gcccaacgccttgccgctgctgtccaagctgccgttttttggttgccccatcaactgggc
gatcgcctggtgtataaaaaggtgcgagcaggcattgggggagaggttgccttttttgtc
agtggtggaggctcgatcgctgaacacctggaagatttttttgaagtcgttggtattccg
attttgggcggctatgggctgaccgaaaccgcgcctattacccatgtgcgtcgcccctgg
cgcaacattcggggtggtgatgggcaacccctacgcgacaccgaaacccgcattgtcgat
cttgaaacccgccaaccgctgccactgctgaagcaagggctagtcctgattcgtgagcct
caggtcatgcagggctactacaaaaacccggaagcaacagctaaggcgatcgatgccgat
ggctggttcaacacaggcgatttgggttgggtgacggagcaaggcgatctaatcatcacc
ggacgcgctaaagacacgatcgttctgacgagcggtgaaaatatcgaaccgcagccgatt
gaagatgcctgcctccgcagcgcttacattgaccaaatcatgctcgttggtcaggatcaa
aaagtgttgggagcactaattgtgcccaacctagaggcattgcaaaagtgggcagccgcg
cagaatcttgagctgcaactgcctggggaggaggaaggagagaggagagaggagagagag
aggagtcagaagccagaatcaactcaaaacgcttcacccctcaccccttactccttaccc
ctgaccctgaacagcaaacccgttcaagacctagtacggcaggaactcaaccgagaagtg
aagaatcgtccgggctatcgggcagacgatcgcattggtccgtttcgactgctactagag
ccttttacgatcgacaatgggctgctgacacaaacgctaaaaatccggcgcaatgtcgtg
atggaacgctaccagggtatgattaacgagatgttcgttggctga
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