Stenomitos frigidus: RBJ76_14235
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Entry
RBJ76_14235 CDS
T10829
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sfri Stenomitos frigidus
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBJ76_14235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfri03021
]
RBJ76_14235
Transcription machinery [BR:
sfri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBJ76_14235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
DUF2316
TraC
Motif
Other DBs
NCBI-ProteinID:
XHX81041
LinkDB
All DBs
Position
3002759..3003760
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AA seq
333 aa
AA seq
DB search
MTAKLSSDVTETDSAESEVAELDFAIDLTEIEELDPDDPLPDKVPYKPTKAERLGLSDDS
VGLFLREMARYPLLTQAQEIELAREIVKGGDRGEQAKRKLVRANLRLVVSIAKKYLNRGV
PFLDLIQEGAMGLMRAAEKFDYERGYKFSTYAYWWIRQGITRAIASQSRTVRLPVHMVEK
LNQVRKARQTLSQTLGRKPTKAELAAALEIDEDKLEQVLDVSQGTLSLHAWVGREEDTEL
MQLIEDADNIAPNDCLDHKLLCDRLNSVLDHLSDRERDVIKLRFGLEDGQHYTLTEIGEL
YQLSRERVRQIQAKAMRKLRHPRRQALLKDWIR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaaattgtcttctgatgtcactgaaactgattctgccgaatcagaggttgct
gaacttgattttgcgatcgatctcaccgaaattgaagagctagatccggacgaccctttg
ccagacaaggttccctacaaaccaactaaagctgaacggctgggtctaagcgatgattca
gtagggctatttttacgtgaaatggcacgctatcctctgctgactcaagcgcaagaaatc
gaactggcacgagaaattgtgaagggcggcgatcgtggcgaacaggcaaaacgtaaatta
gtgcgagccaacttacgccttgttgtctcgatcgccaaaaaatatctcaaccgtggcgtg
ccgtttctcgatctgatccaggaaggcgccatgggattgatgcgagccgccgaaaaattt
gattacgagcgtggctacaagttttcaacctacgcttactggtggattcgtcagggtatt
acccgcgcgatcgcctctcagtctcgtactgtgcggttgcctgttcatatggttgaaaag
ctgaaccaggttcgcaaagctcgccaaaccctctcgcagacactcggacgcaagcccact
aaagctgaactagcagcagctctggaaattgatgaagacaagctagagcaggtgttggac
gtcagccagggcactctctcgctgcacgcctgggtcgggcgcgaagaagataccgaactc
atgcaattgattgaagacgcagacaatattgcaccgaatgattgcctggatcacaaactt
ctgtgcgatcgtctcaattctgtcctggatcatctcagcgatcgtgaacgtgacgtcatc
aaactgcgctttgggcttgaagatggacaacactacacccttaccgaaatcggcgaactg
tatcaactttcgcgcgaacgggtacgtcagattcaagcaaaagcgatgcgtaagctacgg
catccacgtcgccaagccctactcaaagactggattcgttaa
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