Stenomitos frigidus: RBJ76_16370
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Entry
RBJ76_16370 CDS
T10829
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sfri Stenomitos frigidus
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfri03016
]
RBJ76_16370 (truA)
Enzymes [BR:
sfri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RBJ76_16370 (truA)
Transfer RNA biogenesis [BR:
sfri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RBJ76_16370 (truA)
Prokaryotic type
RBJ76_16370 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
XHX76014
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All DBs
Position
3456698..3457546
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AA seq
282 aa
AA seq
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MLSSAPPLTQRVALVIQYLGTCFHGWQRQPKHRTVQEEIEKTLEAVLGFPVRIYAAGRTD
SGVHAAAQVAHFDAPAHIPAHRWAAILNARLPGDVLIRASAIVDSTWHARFSALWRRYRY
TLYTDPCPNLFVRPFAWHYYYEPLDESLIRDALLPLIGRHHLAAFHRAGSDRPHSWVDVQ
ATECKRDGALIYIEVQASGFLYGMMRLLVGMLVQVGRGVRSPVNFTEVWEQERREQVKYA
APAQGLCLLRVGYAEFPFPPDVWYDTQPTLTLAALPERSLVM
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcttctgctcctccactaacacaacgagtcgccctggtaattcagtatctgggt
acttgttttcatggatggcagcggcaaccaaagcatcgaactgtgcaggaagaaattgaa
aagaccttagaagcagtgttgggatttcctgtgcgcatttatgcggctggcagaaccgat
tccggcgttcatgcggcagcccaagttgcccattttgatgcacctgcacatattccagct
caccgttgggcagctattctcaatgctcggttgccaggcgacgttttaattcgtgcctcg
gcgatcgtggattctacctggcatgcaagattttcagcgctttggcgacgctatcgctat
acactttataccgatccctgccctaacttatttgttcggccttttgcgtggcactactac
tatgaaccgctagatgagtcgctcattcgcgatgccttattgccactgattgggcggcat
catctggcagcgtttcatcgcgctgggtcagatcgcccccactcctgggttgatgttcag
gcgacagagtgtaagcgcgacggtgcactgatttatattgaagtgcaggcaagcggtttc
ctttacggtatgatgcgccttttagtaggaatgttggtacaggttggacgtggcgtgcga
tcgcccgttaactttactgaagtctgggaacaagagcgtcgagaacaggtgaagtatgct
gctccagcgcagggactttgcttactgcgagtcggctatgcagagtttcccttcccccct
gatgtctggtacgacacgcagccaaccctgactttagcagccttgcctgagcgatcgctg
gtcatgtaa
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