Stenomitos frigidus: RBJ76_17665
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Entry
RBJ76_17665 CDS
T10829
Name
(GenBank) GAF domain-containing protein
Organism
sfri Stenomitos frigidus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
Response_reg
GAF_2
HATPase_c
PAS_4
PAS
PAS_3
HisKA
PAS_9
Hpt
GAF_3
CHASE3
PAS_8
PDE8A_N
Herpes_V23
Motif
Other DBs
NCBI-ProteinID:
XHX76258
LinkDB
All DBs
Position
3704237..3709339
Genome browser
AA seq
1700 aa
AA seq
DB search
MPTNEPARQQVLLECKILDTRPEKAFDDITRLAAYLCQVPIALVSLIDAERQWFKSKVGL
EAAQTHRDLAFCAHAILQPQIFIVRDALEDDRFARNPLVTGAPYIRFYAGVPLITVDGYA
MGTLCVIDTVPRKLSAEQIDALYILARQVTKQLELRRRLADWELVSVARQPLTKTHWQFL
QNMALGLSLAAALLIGAAITSYRSLHDLGQSYQLVSNQHEALKHVDQFFAALKTIELNDY
RYAISGQQQVLDASNLALAKATQSLQALSSLSPQPTQPLQLQRLELLLEQATIARQRVVE
QRRNGGAEAVLRSIQGADYQNDINRMQQIMTVSEQEAATFSKQWSAQVKTTATQTMNQLL
GSLLFDLGIFLLLFYLGCREINKHQRTEVQLEQERDLTAAITDTAGALIVVLDRQYCVVR
FNQACEVVTGYSFEELVGKRLEDVLLPTESVQPAQAVLKSIQSRAFVTSQHEHHWVTRTG
DRRLIAWSSTGLLDASNTVEYFVQTGTDITELRHSEAALRDSEHQYRSVVDSVREVIFQR
DLAGLWTFLNPAWTEIMGFAVNESLGKHFLECVHPDDRHTAIQSLQPVLDGQQSDSRCKI
RYLTKSGDIRWMETFVRLIKADNGVTTGVCGTLNDITDREQADQRRAAQYAITKVLAESA
TLDEATPKILQSLCESLHWDLGQLWRIDTEMSVVRFVATWHQPSLSVAEFEASTQQLTFT
YGVGLIGRVWSEQKPLWAADIAQECNFQRKGVALDADLHQACGFPIIIKDTVVGIISAFN
QKSGQPDDDLLTMMTAIGRQFGQFIERKRVEEEALRQNQRSQLLSTITLRIRQSLDLDDI
LKTTVSEIREFLQADRVSIYKFQPHHDSTVVVESVTEGWLPILGYQLPEAAFEDSLMQAC
VDRRILAIDTINQSGIPLWYKDLLTQFQIKATLGVPILENEQLWGLLFADQCSAPRRWKP
FEIDFLKQLADQVSIALAQARLLATQVQQRQTLTQQNLELKQAREAAEAARKEAEQAAQT
KSNFLATMSHEIRTPMNAVIGMTGLLLDTKLDSQQQDFAETIRCSGDNLLTLINEILDFS
KLEAGEVALEVLDFDLSLCIEEVIDLLAATAQSKELELVTLLPSTVPIALRGDVTRLRQI
LINLTGNAIKFTHQGEVVLRVSLAAETKTTATIAISVEDTGVGIPQAAQATLFQPFIQVD
ASTTRKYGGTGLGLAICKQLVECMNGTIGVESVFHQGSRFWFAIPFEKQLSLLAGAPTHD
RTVCLDGLKMLVVDDNATTRQMLREQTTDWGIVVDEAATAIAALQRLKEAAATEQPYALA
MIDLQMPDQDGKWLGQEINADPVLRSMPLILMTARHQSDTQRLLNRDFSAYLMKPVRQAR
LLECLMAVLHQPTALVAAERALAATTQIPLTPELDATQAPIARLKLLLVEDSAVNQKVAL
HQLRTLGYTADVAANGQEVLALMASIPYDIVLMDCQMPLLDGYDTTRAIRKLEASLEQHT
VIIAMTANAMKEDRDRCLEAGMDDYLSKPVRKEELAVKLASWSHRLQENARAHTVVTSHI
ETTPQMPLTSQPGTATAVSEAALAQSCDVIDWHYLHEISVGDSAYERELLQMLMAVLPAY
VQTLAVGIDTGDYDCIEQAAHLIRGSSSSVGVRSLAAIAGRLEDQAREKQLDHPAQQLLE
VKDALSQLQQVVDRTLALPH
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaaatgaacctgctagacagcaggtgcttttggagtgcaagattttggatacc
aggccagagaaagcgtttgatgatatcacacgactggctgcctatctttgccaggtgccg
atcgcgttagtcagcctgattgatgctgaacggcagtggtttaaatctaaggttgggctt
gaggcggcacagacccatcgcgatctcgcgttttgtgcccacgccattttgcagccacaa
atcttcatcgtgcgtgatgccttagaggacgatcgctttgctcggaatccattggtcacg
ggcgcaccctacatccgcttttacgctggagtgccactgattacggtcgatggttatgcg
atgggaacgctgtgcgtcattgatacagtaccccgaaagctaagtgctgaacagattgac
gcgctgtacattctggcgcgacaggtaacaaagcaactcgaattgcggcgcaggttggcg
gattgggaactcgtctctgtagcgcgtcaaccgttaactaaaacgcactggcagtttctc
caaaacatggcgctgggtttaagccttgccgctgccctgctgattggggctgccattacg
tcgtatcgcagtctgcatgacctggggcagtcttaccagttggtctctaaccagcacgaa
gcgttaaaacacgttgaccagtttttcgcagcactgaagacgatcgagttaaacgattac
cgttatgccatctcaggacaacagcaagtcttagatgcttctaacctggctctggcgaag
gcaacgcagagtcttcaagccttgtctagcttgagtccacagcccacgcagccgttgcaa
cttcagcgtctagaactgttgcttgagcaagcgacgatcgccagacagcgtgtggtggaa
cagcgacgtaacggtggtgcagaggcggtgctgcgatcaatccagggggctgactaccag
aacgacatcaaccgtatgcagcagataatgactgtcagcgaacaggaggcagctaccttt
tcaaagcagtggtcggcgcaggtaaaaaccacagccactcaaacaatgaatcagttgctt
ggtagcctcttgtttgatctgggcatcttcctgctgcttttttacctgggttgtcgcgaa
atcaacaaacatcagcgtacagaggttcagcttgagcaagagcgcgatctgacggctgcc
attaccgatacagccggtgcgcttattgttgtactcgatcgccagtactgcgttgtacgg
tttaaccaggcgtgtgaagtggtgactggctatagctttgaggagctagtaggcaaacgg
ttggaagacgtgctgctaccaaccgagtcagtgcagcccgcccaggctgtcttaaaaagc
atccagtctagagcgtttgttaccagtcagcacgagcatcactgggtgacgcggacgggc
gatcgacgcttgattgcctggtctagcacgggtctgctagatgccagcaataccgtggaa
tacttcgtccaaacaggtactgacatcacagaactacggcactctgaagccgccctgcga
gacagcgaacaccagtaccgctcagtcgttgatagcgtgagagaagtgatcttccagcgc
gatcttgctggtctctggacgtttcttaaccctgcctggactgaaattatgggctttgcg
gtcaacgagagcctgggcaagcactttctggaatgcgtgcacccggacgatcgccacaca
gcaatccagtccctgcaacctgtactggatggtcagcaaagcgatagtcgctgcaaaatt
cgctacctcacaaaaagcggcgacatccgttggatggagacgtttgttcgactaatcaaa
gctgacaacggcgtaacgacgggcgtttgtggcacgcttaacgatatcaccgatcgcgaa
caagcagaccagcgacgtgcggctcaatatgccatcaccaaagttttagcagagtccgcc
acactggatgaagcgaccccaaagattttgcagtctctttgcgaaagcttgcattgggat
ttagggcagctttggcgcattgataccgaaatgtctgttgtgcgctttgtcgcgacctgg
catcagccgtcgctgtcggtcgctgagtttgaagccagtacgcagcaattgaccttcaca
tatggtgtagggctaattggtcgtgtttggtcagagcaaaaacctctttgggcggctgac
attgctcaagagtgcaattttcagcgtaaaggtgtcgccctagatgccgacctgcatcaa
gcgtgtgggtttcccatcatcattaaagatacggttgtcggcatcatttctgcgttcaat
cagaagtccggacagccagatgatgacctgctaacgatgatgacggcgatcgggcgacag
tttggtcagtttattgagcgcaaacgagtggaagaagaagcgctgcggcagaatcagcga
tcgcagcttctctctaccatcaccctccgtattcggcaatcgctcgacctcgacgacatt
ctgaagacgactgtgtcagaaatacgggaatttttgcaagccgatcgagtctcaatttac
aagtttcagcctcatcacgatagtaccgttgtcgtggagtctgttaccgaaggctggttg
cccatccttggctatcagctaccagaagcagcgtttgaggacagtctcatgcaggcgtgc
gttgatcgacgcattttggcgatcgacaccattaaccagtctggtatcccgctctggtac
aaagatctgctaacccagtttcaaattaaagccactctaggcgtgccgattttagagaat
gagcaattgtggggtttgctctttgctgatcagtgttcagcgccacgacggtggaaaccc
tttgaaattgacttcctcaaacaactggcagatcaggtaagtattgcgttagcccaggca
cgtcttctggctacccaagtgcagcagcgtcagacgttaacacaacaaaacctggagcta
aagcaagcacgtgaagctgccgaagccgcccgcaaagaggcagagcaagccgcacaaaca
aaaagtaactttctagcaacgatgagccatgaaattcgcacgccgatgaatgcggtgatc
ggcatgactggcttactacttgatacaaaactggactcgcagcagcaagattttgccgaa
acgattcgctgtagcggcgataatctcctgaccttaattaacgaaatcctcgatttttct
aagcttgaagcgggcgaagtcgcacttgaagtgcttgattttgatctcagcctctgtatc
gaagaagtaatcgatctcctggcagcaaccgcgcaaagcaaggaactagaactcgttacg
ctgctaccgtcaacggtgccgatcgcgctccgcggtgatgtcactcggctgcgtcaaatt
ttgatcaatctgactggcaatgcgatcaaatttactcatcaaggcgaagttgtccttcgg
gtttctttagccgctgaaacgaagacaaccgctacgatcgcgatttctgtagaggatacg
ggtgtcggcattccgcaggctgctcaggcaacactgtttcaaccattcattcaggttgat
gcttccactacgcgaaaatacggtggtaccggcttggggctagcaatttgcaagcagttg
gttgagtgtatgaacggcacgatcggggtcgaaagcgtgttccatcaaggatctcgcttt
tggttcgctattccatttgagaaacaactttctttgctagctggtgcgccaacccacgat
cgcaccgtttgtttggacgggctaaaaatgctcgtcgttgacgataatgcgacgactcgt
caaatgttgcgcgaacaaacgactgattggggcatcgtggtggatgaagctgccaccgcg
atcgccgcgttgcaaaggctgaaagaggcagcagccacagagcaaccctatgctctagcg
atgatcgatttgcaaatgcctgaccaggatggcaaatggctggggcaagagattaacgcc
gatccagtgctcaggtcgatgccattgatcctgatgacagcacgccatcaaagtgatacc
caacgtttactcaaccgtgacttttcggcttacctcatgaaacccgtccgtcaggctcgg
ttactggagtgcttgatggcagtgttgcatcaaccaacggcgcttgtagcagcggagcgc
gccctggcagcgacgacccaaatacccctaacgcctgagctggatgcgacacaggctccg
atcgctcgattaaaactgttgctggtagaagacagtgccgttaatcaaaaagtagcgtta
catcaattaagaacgcttggctacactgctgatgtggctgccaatggtcaagaggtgctg
gcgttgatggcaagcattccctacgatattgtgttgatggattgccagatgccgctgctg
gatggttatgatacaactcgtgccattcgcaagttggaagcctctttggagcagcatacg
gtcatcattgctatgactgctaacgcgatgaaagaggatcgcgatcgctgcctcgaagct
ggcatggatgattatctcagtaagccggtacgcaaagaagaattggcagtgaagctcgct
agttggagccaccgtctacaagagaatgcgcgggcacatacggttgttacgtctcatatt
gaaaccacacctcagatgccgctgacttcgcaacccgggactgcaacagcggtgagtgaa
gctgcactcgctcagtcttgtgatgtcattgattggcactatttacatgaaatttcggtt
ggtgatagtgcgtatgagcgagaacttttgcaaatgctgatggcagtcttgccagcctat
gtccagacgctagcagtgggcatagacacaggtgattatgactgtattgagcaggcagcc
catttaattagagggtcatcctccagcgttggggtgcgatcgctcgcagccattgccgga
cgcttggaggatcaggcacgggaaaagcagcttgaccatcccgctcaacagcttttggaa
gtgaaggacgcactgagccaattgcaacaggtggtcgatcgcacgcttgcgttaccgcac
tag
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