Stenomitos frigidus: RBJ76_18490
Help
Entry
RBJ76_18490 CDS
T10829
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
sfri Stenomitos frigidus
Pathway
sfri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RBJ76_18490 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfri01007
]
RBJ76_18490 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfri03016
]
RBJ76_18490 (alaS)
Enzymes [BR:
sfri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
RBJ76_18490 (alaS)
Amino acid related enzymes [BR:
sfri01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RBJ76_18490 (alaS)
Transfer RNA biogenesis [BR:
sfri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RBJ76_18490 (alaS)
Prokaryotic type
RBJ76_18490 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
DRC7_C
DUF1192
DUF7117
Motif
Other DBs
NCBI-ProteinID:
XHX76418
LinkDB
All DBs
Position
3896216..3898843
Genome browser
AA seq
875 aa
AA seq
DB search
MATPFSGAQIRQTFLDFYADKGHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRPAEF
PRATTSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGNYFKSQAIAWAWELSTKVFGLPP
ERLVVSVFEDDDEAFALWRDEIGIPAHRIQRMGEKDNFWVSGPTGPCGPCSEIYYDFHPE
KGDEHIDLEDDTRFIEFYNLVFMQYNRDAAGTLTPLANKNIDTGLGLERMAQILQKVPNN
YETDLIFPIIQKAAAIANLDYATADATTQIALKVIGDHVRAVVHMIADGIVASNEGRGYV
LRRLIRRVIRYGRLIGIEGEFTPKVAEAAIALSESAYPSVRAMERTIKVALQREEISFLK
TLDRGEKLLAEVIEQMGAGGQISGTDAFTLYDTYGFPVELTEEIAAEKGLTVDAKGFEAE
MEQQRRRSQMAHTTIDLTALGTLDHLAEHIEQTEFLGYAQPATDAAVQVLMVNGKPKQTV
EAGTEVQVVLDKTPFYAESGGQIGDRGYLSGDDVLVRIEDVQKESAFFVHYGRIERGTLH
TGDAVTAQIDLACRRRAQAHHTATHLLQSALKKLVDDNISQAGSLVSFDRLRFDFHCARP
LTLDELQQVEEQVNTWVAEAHHAETSILPIAEAKAKGAIAMFGEKYGSEVRVLDVAGVSM
ELCGGTHVSNTAEIGLFKIVSETGVAAGIRRIEAIAGSAVLEYLNIRDAVVRDLSDRFKV
KPEEISDRITTLQTELKTTQKQLEAVKGQLALAKADSLLAQAEAVGEFHILIAQLDDVDP
ESLKTAAEQLQQKLTNGAVVLGSVPEPDKVSLVAAFSPAVVKKGLQAGKLVGAIAKLTGG
GGGGRPNLAQAGGRDASKLPEALAEAKTQLKAALQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggctactcccttcagcggcgctcaaattcggcaaaccttcctcgacttttatgcagac
aaagggcacaagatcttgcccagtgcttctctggtgccggaagacccgactgtactgctg
acgatcgctgggatgttgccgtttaagcccatctttctggggcagcgtccggcggagttt
ccccgtgctactacatcgcaaaagtgtatccgtacgaatgacatcgagaacgtaggacgc
accgcacggcatcacacgttctttgagatgttgggcaacttcagctttggcaactacttt
aagtcgcaggcgatcgcgtgggcgtgggaattgtctacaaaagtttttggcttgccgccc
gaacggctcgtcgtgagtgtgtttgaagacgacgacgaagcctttgccctctggcgagat
gagattggcattccagcgcatcggattcagcgcatgggcgagaaagataacttttgggtg
tctggtcctacggggccgtgtgggccgtgttcggaaatctactacgactttcatcccgaa
aagggcgatgaacacatcgatctggaagatgacactcggtttatcgagttctacaacctg
gtgttcatgcagtacaaccgggatgcagcaggcacgctgacaccgctggcaaacaaaaac
attgatacaggcttggggctggaacggatggcgcaaatccttcagaaagtgcccaacaac
tacgaaaccgatctgattttccccattattcagaaggcggcggcgatcgccaacctcgac
tacgctactgctgacgcaacgacgcagattgcgctgaaagtgatcggcgatcacgtccgt
gctgtggttcacatgattgctgatggcatcgtggcatccaacgaagggcgcggctacgtg
ctgcggcggttgattcggcgtgtcattcgctacggtcgcttgattggcattgagggcgag
tttacaccgaaggttgccgaagccgcgatcgcgctgtctgagtctgcttatcccagcgtg
cgtgcaatggagcgaaccattaaagtcgccctacaacgcgaagaaatcagcttcttgaaa
acgctcgatcggggtgagaagcttctggcagaagtcatcgagcaaatgggtgcgggtgga
caaatttctggcaccgatgccttcaccctctacgacacctatggttttcccgtggagctg
acggaagaaattgcggctgagaaaggcttgaccgttgatgcgaaaggctttgaggccgaa
atggaacagcaacgccgccgctctcagatggcacacacaaccatcgatctcaccgctcta
ggcacgctggatcatctggcagagcatattgaacagaccgaatttttgggttatgcccag
cctgccactgatgcggctgtacaggttttgatggtcaatggcaagcccaaacaaaccgtt
gaggctggcacagaggtacaggtcgtgctggataaaacgccgttttatgctgagtcgggt
gggcagattggcgatcgcggttatctttctggtgatgatgtcctggtgcggattgaggat
gtgcaaaaagaatctgccttcttcgtccactacggtcgcattgagcggggcaccctgcat
acaggcgatgctgtcaccgcccaaattgatcttgcctgccgtcgtcgcgctcaggcacac
cataccgctactcacctcttgcagtccgcgctgaaaaagctggtagacgacaatatttcg
caagcaggatcgctggtttccttcgatcgcctccgctttgacttccactgtgcccgtcct
ctgacactggatgaactccagcaggttgaagagcaggtcaacacctgggttgccgaagcg
catcatgctgaaacgtcaattttgccgatcgctgaagccaaagcaaaaggcgcgatcgcg
atgtttggtgaaaaatacggcagcgaagtccgtgtactggatgtggcaggcgtgtcaatg
gagttgtgcggtggcactcacgtcagcaacacggctgaaattggtctgttcaaaatcgtt
tccgaaacaggtgtggcagcaggcattcggcggattgaagctattgcgggatcagccgtg
ctggagtacctgaatatacgcgatgccgtggtgcgcgacttgagcgatcgcttcaaggtc
aagcccgaagagattagcgatcgcattaccaccctgcaaaccgaactcaaaactacccaa
aagcaactcgaagccgtcaaaggtcagcttgccctcgccaaagccgatagcctgctggca
caagccgaagccgtgggtgagttccacattctgatcgcgcaacttgatgacgttgacccc
gaatccctcaaaacggctgccgaacagcttcagcaaaagttgaccaacggcgcggtggtg
cttggctctgtacccgaacccgataaggtcagtctcgtcgctgccttcagccctgctgtt
gttaaaaaaggcttacaggcaggaaaactagtcggcgcgatcgccaagctcacaggtggc
ggcggcggcggacgacccaacctcgcccaggcaggcggacgcgatgctagcaaactaccc
gaagcactggcagaggctaaaacccaactcaaagcagccttgcagtaa
DBGET
integrated database retrieval system
