Stenomitos frigidus: RBJ76_19610
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Entry
RBJ76_19610 CDS
T10829
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sfri Stenomitos frigidus
Pathway
sfri00550
Peptidoglycan biosynthesis
sfri01100
Metabolic pathways
sfri01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBJ76_19610 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBJ76_19610 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfri01011
]
RBJ76_19610 (mrdA)
Enzymes [BR:
sfri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBJ76_19610 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfri01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RBJ76_19610 (mrdA)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
XHX76625
LinkDB
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Position
complement(4137762..4139579)
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AA seq
605 aa
AA seq
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MTLTQPSTVVTQTTPRTVGRRYQAVALMLGVSLVMVVGMGSRLAYLQLLEGDRNQQLAEN
NRIRLIPKQPERGKILDRKGRMLAGSRLSHSVFLWPLARKKVEWTATLQRLSQILNVPEA
TVKNRLEQAGYNSPFLVRIARGVSPAQVTALAEYGSEMEGVQVDAEAVRYYPNGDLAAHV
LGYTGEMDDRELEKRKSEGYRLGDVIGQMGVESTYEMLLRGEWGGQQVEVDGEGQVVRVL
GKKPTRTGRDVQLTLDLELQKAAETALGDRKGAIVAIDPTNGAVLAMVSRPTFDPNLFST
RITDAQWQRLQSKDHPFVNRAIRGFPPASTFKIVTTTAALETGKFSPDTVLGTYPSITIG
GIEFGDWNRAGFGPLGFVGAMQWSSDTFFYQIAMGVGDRDLIQWTRRYGFGRKTGIDLAD
EESPSLVPDDEWKRKEIKEGWYLGDTVNMSIGQGFLQATPLQVAVMFAVPANDGYLVKPH
LLKDNEAAQNWREPLNLKPETVRILREGLRAVIDSGTGTALNVASLPPMSGKSGTAEDFG
RESHTWFGAYGPTAKPEIVVVAFGENSGGGGGSFAAPMVRQVLAAYFNPKKKIVSPSQLE
LVPTD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgactttaactcaaccttctactgttgttactcaaaccacaccgcgcaccgtgggacgg
cgctaccaggcggtagccctgatgctgggcgtttcgctcgtcatggtggtgggcatgggt
agccgccttgcgtacctgcaactgctggagggcgatcgcaaccagcaactggctgaaaac
aaccgtattcgcctgattcccaaacagccagagcgcggcaaaatcctcgatcgtaagggc
agaatgctcgctggtagccgtttatcgcattctgtctttctctggcccctagcacgcaag
aaggtcgaatggacggctaccttgcagcggttgtcgcagatcctcaacgtaccagaagca
actgtcaaaaatcgtttggagcaagcaggctacaactctccttttttggttcgcattgcg
cgtggtgtgagtccggcacaggtaacagccttagcagaatacggcagcgaaatggaaggc
gtgcaagttgatgcggaggctgtccgctattaccctaacggcgacctggcagcgcacgtg
ctgggttatacgggtgaaatggacgatcgcgagctcgaaaagcgcaagagcgaaggctat
cgactcggcgatgtgattggtcaaatgggtgttgagtcaacttacgaaatgctcctgcgt
ggtgagtggggtgggcaacaggtcgaggttgacggtgaaggacaggtggttagagtcttg
ggcaaaaagccgactcgaacaggcagggatgtacagcttacgctagatctggagctgcaa
aaagcggcggagacggcattgggcgatcgtaagggggcgatcgtggcgatcgatccgacg
aatggcgcagtgctggcaatggtcagccgtccaacgtttgaccccaacttattttccacc
cgcattactgatgcccagtggcaacgactgcaaagcaaagaccatccgtttgttaaccgt
gccatacgaggcttcccgcctgccagcaccttcaaaattgtcaccactacagctgcttta
gaaacggggaaatttagccccgataccgtactgggaacttacccatccattaccatcggt
ggcattgagtttggcgactggaaccgtgctgggtttggtccgttaggttttgtcggtgcc
atgcaatggagcagcgatacctttttctatcagattgcgatgggtgtcggcgatcgtgac
ctgatccagtggacacggcgctacggctttgggcgcaaaacaggcattgacctagcagat
gaagaaagccctagcctcgtacccgacgatgaatggaagcgcaaagaaattaaagaaggc
tggtatttaggcgatacggtcaatatgtcgatcggacaaggctttctacaagctacgcca
cttcaggtcgctgtcatgtttgcggtaccagccaacgatggctatctcgtcaagccacat
ctcctgaaagacaatgaagctgcacaaaactggcgggaacccctcaacctgaaacctgaa
accgttcgcattctccgcgaagggcttcgtgcggtcattgatagcggcacgggtacagca
ctaaacgtagcgtcactgccaccaatgtctggtaaaagcggtacggcagaagatttcgga
cgggaatcccatacctggtttggagcctatggtcccactgcaaaaccagaaattgtcgtt
gtagcattcggtgaaaactctggcggcggcggcggttcatttgcagcacccatggtacgg
caggttctagcagcctactttaacccgaaaaagaaaattgttagccccagccagcttgag
ttggtgccaaccgattag
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