Stenomitos frigidus: RBJ76_21825
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Entry
RBJ76_21825 CDS
T10829
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sfri Stenomitos frigidus
Brite
Enzymes [BR:
sfri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RBJ76_21825
Transfer RNA biogenesis [BR:
sfri03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RBJ76_21825
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NCBI-ProteinID:
XHX77052
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Position
complement(4616044..4618056)
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AA seq
670 aa
AA seq
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MEKGTLVEFRLGSERRLAVVERPEGKKHWIATDDRGQSHTLHPRQITYEVGGTYNPTDIT
PFLKSIQPYLDPSNLEIAWELLVEDGEAADPTKMALLLFSDQAPPLSYAAHCLLSDDKLY
FKLKGDRYEPRPQAQVSELKHQLEIEAQRQQEGQGFLARIDQALEGQSVEWQHSDRPRLD
ALERFATFGEEATNRAPALETLLHLKRSETSQAAFQLLVEMGLWSIHENLALRRSQIPVH
FPSRVLDVVHRCLTSPPPDLNADRLDLTHLKVYTIDDESTLEIDDGLSLEYLADGVQRLW
IHIADPTRWLSPGDELDLEARRRITTLYLPTGMISMFPTELATGPMSLVQGRVCCALSFS
VILSPEGAVQDYSIYASLIKATYRLTYDDVDEMLELGVQAESELEAIARWAKRRQTWRQS
QGAISIHMPESSIKVYDDEITIQVLNDSLARQLVAEMMILAGEVAARYGQAHNLPIPFRN
QPQPELPSEEELLQLPSGPVRSCAIRRCMPRSELTITPARHASLGLDTYTQVTSPIRRYS
DLLSHFQIKAHLRGAPLPFSAEAVKELLLSISSAAYEAVLVERQTNRYWGLEFLRRNADE
VWDALMLRWLREHENLGLVLLEDLGMELPMRFTRPVTPGDRLELKVSHADPRQDIIHFQE
MMYQEAQAKS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggcacccttgttgaatttcgtcttggcagtgagcgtcgccttgctgttgtc
gagcgtccagaaggcaaaaaacactggattgctacagacgatcgtggtcagtcacacacg
cttcacccccgccaaattacttatgaggtgggaggcacgtacaaccccacagacattacg
cctttcctaaagtcgatccagccataccttgatccatcgaacctggaaattgcctgggaa
cttctggtagaagacggtgaagcggctgaccctaccaaaatggcactgttgcttttttcg
gatcaggctccacccctcagctatgcagcccattgcttactgagtgacgataagctctac
ttcaaactcaaaggcgatcgctacgagccacgccctcaagctcaagtttcagagctaaag
catcagctagagatagaagcgcagcgacagcaggaggggcaaggctttttagcacgcata
gaccaggcattggaggggcaatcagttgaatggcagcacagcgatcgccctcgtctggac
gctcttgagcgcttcgctacgtttggtgaagaagcaaccaaccgcgcgcctgcgttagaa
accctgttacacttgaagcgatctgagacatctcaggctgcctttcaattactggtcgag
atggggctgtggagtatccatgagaacttggcattgcggcgtagccagattccagttcat
tttccttccagggtattggatgtggtacatcgttgcttgacctctccgccgcctgacctt
aacgccgatcgactggatttgacccatctcaaggtctataccattgatgatgaaagtaca
cttgagattgacgatggtctcagtctggaatatcttgctgatggcgtgcagcggctgtgg
attcacattgctgacccaacccgctggctttcaccaggcgacgaactggatttagaggca
cgtcgccgcatcacaacgctgtacctgccaacggggatgatttccatgttcccgaccgag
ctagctacgggacccatgagcctggtacaaggacgggtctgctgtgcacttagctttagc
gtcattctcagcccagaaggtgcagtccaggactacagcatttacgccagtctcatcaag
gcaacgtatcgcctgacctatgatgatgtggatgaaatgttggagcttggtgtacaggca
gaatcagaattggaggcgatcgcacggtgggcaaaacgccgccaaacctggcgacagtct
caaggagccattagcattcacatgccagaatcgtcgattaaggtctatgacgatgaaatt
acgattcaggtattgaacgattctctggcgcgtcagctagttgccgagatgatgattctg
gcaggtgaggttgcggcacgctacggtcaagcccacaacttgcctattcctttccgtaat
caaccgcaaccagaactaccatctgaagaggaattgctgcaactaccatcgggtccagtg
cgatcgtgtgcgattcggcgttgtatgcctcgtagtgaacttacgattactccggctcga
cacgccagcctgggcttagacacctatactcaagtgacatcgcccatccggcgctatagc
gatctgctgtcacattttcagataaaggcgcatcttcgtggtgcaccgctgcctttctca
gctgaagcggtcaaggagttactcttaagcattagttccgctgcctacgaggctgtgctg
gtggaacgccagacaaaccgctattgggggctggaattcctacggcggaatgcggatgaa
gtttgggatgctctcatgctgcgttggctaagagaacatgaaaatctcgggttggtgttg
ctcgaagacctgggcatggaattaccgatgcgctttacccgacccgtcactccgggcgat
cgccttgaactcaaagttagccatgctgatcctcgtcaagacatcattcattttcaagaa
atgatgtatcaagaagctcaggcgaaaagttag
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