Stenomitos frigidus: RBJ76_22270
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Entry
RBJ76_22270 CDS
T10829
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
sfri Stenomitos frigidus
Pathway
sfri02010
ABC transporters
sfri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RBJ76_22270
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBJ76_22270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfri02000
]
RBJ76_22270
Transporters [BR:
sfri02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RBJ76_22270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
ABC_sub_bind
Motif
Other DBs
NCBI-ProteinID:
XHX77138
LinkDB
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Position
complement(4715643..4716881)
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AA seq
412 aa
AA seq
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MQVTTRLSVLAALAIAIGACSPNPPPTTTGASPQASDASKTTATGGAATGIPIGIGVAQT
SNVALLGQEEVAGAKIAEQYFNSKGGINGTPIRLVFQDTGGDEQGAINAFQALITKDKVV
GIVGPTLSQQAFSANPIADRAKVPVIGPSNTAKGIPQIGEYIARVSAPVSVVAPNAVKAA
LKINPQIKKVAVFYAQNDAFNKSETEIFQQTVKEQNLELATVQKFLTTDTDFQSQVTAAI
NLKPDLAIISGLAADGGNLVRQLRELGYKGLIIGGNGLNTSNVFPVCKALCDGMLIAQAY
SPEQPGEVNAAFRTAYRNQFKKEPPQFSAQTFAGVQVFVEALKVLDKQSKVSQTALPALR
TALNKQLLAGKYNTPLGELSFTPEGEIVQKEFYVAQIKMDANGSSGTFTYLK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaacaactcggctctcagttttagcggctttggcgatcgcgatcggtgcctgt
agtcccaatccgcctccgacaacgacgggtgcctcaccgcaggcatcggatgcgtcaaag
acgactgccactggcggagccgctacgggcattccgatcggcattggtgtggctcagact
agtaacgtggcgctgctagggcaagaagaagtcgctggtgcaaaaattgccgagcaatat
ttcaacagtaaaggcggcatcaatggcacaccgatcaggcttgtgtttcaagacacgggc
ggcgacgagcaaggcgcaattaatgcgtttcaggcactgattacaaaagacaaagtagtc
ggcattgttggacccacactatcccagcaggcatttagtgccaacccgatcgccgatcgg
gcaaaagtgcccgtgatcggaccttccaacaccgctaaaggtattccccaaattggtgag
tacattgctcgtgtctctgcgcccgtctcggtggtggctcctaacgctgtcaaagccgcg
cttaaaatcaatccccaaatcaaaaaagtggcggtcttctatgcccagaatgatgccttc
aacaagtccgaaaccgagatttttcagcagacggtgaaggaacaaaacctcgaacttgcc
accgttcaaaagttccttaccaccgacaccgactttcaaagtcaagtaacggcagccatt
aatctcaagcccgatttagccatcatttctgggctagcagcagatggtggtaatctcgtg
cggcagctgagagaactgggctacaaagggctgatcattggcggcaatgggctgaatacg
tccaatgtgtttcccgtgtgcaaagcgctgtgtgacggtatgttgattgcccaggcatat
agcccagagcagcctggtgaagtgaacgctgcctttcgcaccgcgtatcgtaaccagttc
aaaaaagagccaccgcagtttagtgcccaaacctttgcaggcgtgcaggtgtttgtagaa
gcgctaaaggtcttagataaacagtcaaaggtgagccaaactgccttaccagcgttacga
actgcactcaacaagcaacttctggctggcaaatacaacacgccactgggcgaactttca
tttacacctgaaggtgaaattgtgcaaaaagaattctacgttgcccaaatcaaaatggat
gcaaacggcagtagcggcacgtttacctatttgaaatga
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