KEGG   Stenomitos frigidus: RBJ76_23680
Entry
RBJ76_23680       CDS       T10829                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sfri  Stenomitos frigidus
Brite
KEGG Orthology (KO) [BR:sfri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfri03032]
    RBJ76_23680
   03400 DNA repair and recombination proteins [BR:sfri03400]
    RBJ76_23680
Enzymes [BR:sfri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     RBJ76_23680
DNA replication proteins [BR:sfri03032]
 Prokaryotic type
  DNA Topoisomerases
   RBJ76_23680
DNA repair and recombination proteins [BR:sfri03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RBJ76_23680
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact DUF4982
Other DBs
NCBI-ProteinID: XHX77411
LinkDB
Position
complement(5039153..5040277)
AA seq 374 aa
MRLKAQKRSLEKHIKAVVTADPIASAEAIGLRYVTDDIPGIQRKRSGKKGFTYIDTNGDR
LRDPEEIRRIDALAIPPAYKNVWICPFANGHLQATGRDAKGRKQYRYHPLWRSIRDQSKF
TRMLVFSQSLPQIRQRLEHDLSLPGLPKEKVLAAILRLMELTRVRVGNEEYARSNQSYGL
TTLRDEHVDITGSKMQFHFRGKSGVEHEIELADKRLAKIVKRCQDIPGQELFQYRDAAGE
YQAIDSGDVNAYLRAITEQDFTAKDFRTWAGTVLAAAELADIGTFTSETGAKKNIVQAIK
TVASYLRNRPATCRKYYIHPAILNAYMDESLHQIMKEHAATIVEQSHTLKPEELAVVVML
EQQLMQELQQKVVA
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgcggcttaaagctcaaaaacgctcccttgaaaaacatatcaaagcggttgttactgcc
gacccgatcgcgtctgccgaggcgatcggcttgcgttatgtcaccgatgatataccgggg
atacagcgaaaacgctctggcaaaaaaggatttacttacattgataccaacggcgatcgt
cttcgtgatccagaggagatccgtcgcattgacgcactagcaattccacccgcctacaaa
aatgtgtggatttgtccctttgccaatggacatttgcaggcaaccgggcgagatgcaaaa
gggcgcaagcaataccgttatcatccgttgtggcgatcgatccgcgaccaaagcaaattc
actcggatgctagtgtttagccaatcgttaccgcaaattcggcaacgcttagagcatgat
ttatccctacctgggctaccaaaggaaaaagtgctagcggcaattcttcgcttaatggaa
ctgactcgcgttcgcgttggcaatgaagaatacgcccgttctaatcaatcctatggtttg
accacactgcgcgatgagcacgttgatattacaggctccaaaatgcaatttcactttcgg
ggcaagagcggcgttgaacatgagattgagctggctgataaacgcctcgctaaaattgtc
aagcgctgtcaggatattcccggtcaggagctctttcagtaccgtgatgcggctggagaa
tatcaggcgatcgactctggcgatgtcaacgcttatttgagagccattactgaacaagac
tttacagcaaaggatttccgtacgtgggctggcaccgtactagccgccgcagaactggca
gatatcggcacgtttacatccgaaacgggtgcgaaaaagaacattgtacaggcaattaaa
acggtcgcctcttacctgcgaaatcgccctgcaacctgtcggaaatactatattcatcca
gcgatattaaacgcatacatggatgagtccttgcatcagattatgaaggaacacgcggca
acgatcgttgaacagagccatacgcttaaacctgaagaattagccgttgtcgtcatgcta
gagcaacagttaatgcaggagttacagcaaaaagtagtggcttga

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