Stenomitos frigidus: RBJ76_23820
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Entry
RBJ76_23820 CDS
T10829
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sfri Stenomitos frigidus
Pathway
sfri03030
DNA replication
sfri03430
Mismatch repair
sfri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBJ76_23820
03430 Mismatch repair
RBJ76_23820
03440 Homologous recombination
RBJ76_23820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfri03032
]
RBJ76_23820
03400 DNA repair and recombination proteins [BR:
sfri03400
]
RBJ76_23820
Enzymes [BR:
sfri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBJ76_23820
DNA replication proteins [BR:
sfri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBJ76_23820
DNA repair and recombination proteins [BR:
sfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBJ76_23820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_30
RuvB_N
DnaA_N-like_STI
AAA_19
AAA_16
AAA_5
Herpes_Helicase
PIF1
DUF815
AAA_28
AAA_18
DNA_pol3_delta_C
EF-hand_9
Motif
Other DBs
NCBI-ProteinID:
XHX77434
LinkDB
All DBs
Position
complement(5070896..5072866)
Genome browser
AA seq
656 aa
AA seq
DB search
MTYQPLHHKYRPQTFGDLVGQEAIATTLTNALHQQRIAPAYLFTGARGTGKTSSARILAK
SLNCLAYEVPTEQPCGVCEVCQSIARGSALDVIEIDAASNTGVDNMRELIERSQFAPVQC
RYKVYVVDECHMLSTAAFNALLKTLEEPPNRVVFVLATTDPQRVLPTIISRCQRFDFRRI
PLAAIVQHLTTIAAQEAIAITHEAVTLVAQISQGGLRDAESLLDQLSLLEGEVSVDKVWD
LVGSVPERDLMDLLEAIAQDNPETLLDSVRRLMDRGREPLIVLQNLASFYRDLLIAKTAP
ARNDLVALTPPTWAALCSFAQALDVPAILSGQQQLRSSEDQIKSTTQPRLWLEVTLMGLL
PSAIGSQRSTASGQASPSQAANGGAAVRPPIPTATPSQAEAIAPDVATEVPAIEPLSVSR
PVEVAAALPTATSQPASDQGSDLSETWQQILSHIDLKGTRAMLSVNCHLLNQTDHEILVA
VKAQSMIKMITGMIPQLEKAAAKAFKTKVKVALQVVEATPQAAQTTYPPETVDRPPSSNT
DRTARVNEPTFDQASSFSQQTKASADSPPKPTNPVAEGSVSDSPPASTPDRWQQEDEVTL
AARQLADFFGGRVVDMSDGDTIAEAPKLAEIDAASLQASAAPAPDEDLDSDDDVPF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaaccgctacaccataaatatcgtccacagacctttggtgatctggtcggg
caagaggcgatcgctaccacactcacaaacgctctccaccagcaacggattgcaccggct
tacctctttactggtgcacggggcacgggcaaaacgtccagtgcgcggattctggcaaag
tcactcaattgtttggcatatgaggtgccaacagagcaaccctgtggtgtctgcgaagtg
tgccagtcgatcgccagaggctcggcgttggacgtaattgaaatcgacgctgccagcaac
acaggagtagacaatatgcgagagctgattgagcgatcgcagtttgcacctgtgcaatgc
cgctacaaagtatatgtggtggatgaatgccatatgctcagcaccgcagcgtttaatgcg
ctgctgaagactcttgaggagccgcccaaccgcgtcgtgtttgtgctggcaacaactgat
ccccaacgggtgctaccaaccattatttcacgctgtcaacgatttgattttcggcgcatt
ccgctggcagcgatcgtgcagcatctgaccacaatcgcggctcaagaagccattgccatc
acccatgaggcagtcacactggttgcccagatctctcagggagggctgcgcgatgccgaa
agcttgctggatcaacttagtctgctggaaggtgaggtgtccgttgataaagtctgggat
ctggttgggtcggtgccagaacgcgacttgatggacttgctggaggctatcgcgcaagac
aaccccgaaaccttgctcgatagcgtccggcggctgatggatcgggggcgcgaaccgcta
attgtgctgcaaaaccttgccagcttttatcgagatctgctgattgctaaaacggcacca
gcccgtaatgatctggtcgcactgacaccaccgacatgggcggctctttgtagctttgcc
caagccctggatgtgccagctatcctgtcgggacagcaacagcttcgcagcagcgaggat
caaatcaaaagcacgacacaaccaaggctctggctcgaagtcacgttgatggggctattg
ccatcggcgatcggtagtcagcgatcgaccgcgagtgggcaagcgagtccgtcgcaggcg
gctaatgggggagcagcggtacgtccacctataccgacagcaacaccttcacaggctgag
gcgatcgcgccagatgtagcaaccgaagtacctgcgatcgagcctctgtcagtcagccgc
cccgttgaggtagcagcagcattacccactgccacgagtcaaccagccagtgatcagggc
agcgatcttagcgaaacctggcagcaaattctaagccacattgacttgaagggcacccgc
gccatgctgagcgtgaattgccacttactgaaccagactgatcatgaaattctggtcgct
gtgaaggctcaaagtatgatcaagatgatcacgggcatgattccgcagcttgaaaaagcg
gctgccaaagcgtttaagacaaaagttaaagttgcacttcaggttgtagaagcgacaccg
caagcagctcaaacaacctatccaccagaaacggtcgatcgcccaccgtcgtctaacacc
gatcgcaccgcacgagtcaacgaaccaacgtttgatcaagcaagcagtttctctcagcag
accaaagctagcgcagactctccaccgaaacccactaaccctgttgctgaaggatctgtt
agtgattcccccccagcgtctacgcccgatcgctggcagcaagaagacgaagtaaccctt
gctgccagacaactagctgatttttttggcggcagagtggtcgatatgagcgatggcgac
acaatagcagaagcgccaaagctagccgaaattgatgcagcgagccttcaagccagtgcg
gcaccagcaccagacgaagatctagactccgatgatgacgtaccgttctaa
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