Stenomitos frigidus: RBJ76_24005
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Entry
RBJ76_24005 CDS
T10829
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfri Stenomitos frigidus
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfri03016
]
RBJ76_24005 (truB)
Enzymes [BR:
sfri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RBJ76_24005 (truB)
Transfer RNA biogenesis [BR:
sfri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RBJ76_24005 (truB)
Prokaryotic type
RBJ76_24005 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XHX77468
LinkDB
All DBs
Position
5111184..5112188
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AA seq
334 aa
AA seq
DB search
MNKTQSAFPAMHGFLNLNKPAGFTSHDCVAKVRRLLQMKRVGHAGTLDPAAIGVLPIALG
KATRLLQFLRQDKAYRATVRLGMSTTTDDLEGETLLSQPVAALDLATVKEALQQFQGTIQ
QVPPNYSAIQVQGKRLYDLARAGETIAAKARTVNVFSLEVLDWRSGDFPELDLAIACGPG
TYIRSIARDLGNVLQTGGTLAALIRTSSSGFELTDSLTFEVLEAQQAQGIFQPIAPEAAL
THLSKISLSTAIARRWCQGQRIAIYPTADDQWKSVEDAEAEGHKDEDSTQVYAVDPLQRS
LCVFHEEGHFLGIGKPTDTEVGIILLSQMVFESD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacccaatcagctttccctgctatgcatggttttcttaatctcaataaacct
gcggggtttacgtctcacgactgtgttgccaaagtgcggcggcttttacagatgaagcgc
gttggacacgcaggcacactcgatccagccgcgatcggggtgttgccgatcgcccttggc
aaagcgacccgcctactgcaatttctgcggcaggataaggcgtatcgagccacggtgcgg
ctaggaatgagcacaaccactgatgacttggaaggtgaaacattgctgtctcaacccgtt
gcagcgcttgatttagcgacagtaaaagaggcgctccagcagtttcaaggcactatccaa
caggttccacctaactacagcgccattcaggtacagggtaagcggctgtatgatttggcg
cgggcaggtgaaacgatcgcggctaaagcccgtacggtgaatgtgttcagccttgaagtg
ctggactggcgatcgggcgactttcctgaactggatctagcgatcgcttgtggtcccggt
acgtatattcggtcgatcgcgcgtgacctgggcaatgtgttgcaaacgggtggcacctta
gcggcgcttatacgcaccagcagcagcggctttgagctgacagacagcctgacgtttgag
gtactggaagctcaacaagcgcaaggaatttttcagccgatcgcgccagaagccgcttta
acccatctcagcaaaatttcgttatcgacggcgatcgcccgtcgttggtgccagggtcag
cgcattgcgatttatcctaccgctgatgaccaatggaaaagtgtggaagacgcagaggca
gagggacacaaggatgaagacagtacccaggtctatgcggttgatccacttcagcgatcg
ctctgcgtcttccacgaagagggtcatttcctcggcatcggcaagccaactgatacggaa
gtaggaattattctgttatctcaaatggtttttgagagtgattag
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