Stenomitos frigidus: RBJ76_25625
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Entry
RBJ76_25625 CDS
T10829
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sfri Stenomitos frigidus
Pathway
sfri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBJ76_25625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfri02000
]
RBJ76_25625
Transporters [BR:
sfri02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RBJ76_25625
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
XHX77776
LinkDB
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Position
complement(5477892..5479124)
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AA seq
410 aa
AA seq
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MTHKMPVTHTSISNSSALINRRSFLAGAGSIALSNLLLGCSGQNRQTLKLRLLNGSMPPQ
IVGAYRKHLQQASIAGSLKIAIEPQLQATFDALQAWARSGQPDPSATDRFDWVPFIGKQS
KPVPDLVTIGSYWLEKAVQQTLIQPLDPKQLAGWESLPTDWKALVTRTSATKTTEQLWGA
PYRGGSTVIAYRQDIFKEKGLPPPTDWSDLWRSDLRGHISLLDQPREVIGLTLKKLGQSY
NIANLETVSTLPAELTSLHQQVKLYSSDAYLQPLLMGDTWLAVGWSTDLLPLTQRNQTLA
VVVPKSGTALWADLWVRPAAAQAELFSLAADWIGFGWRPDIAIQLSLLSRTISPVVLTMP
PAKLPDELRQNPVLVPDAKTQAASEFLQPLDRATVLQYQALWQRLRQKVG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgactcataaaatgcctgttacccatacgtccatctcaaactcctcagccctcatcaac
cgccgctcctttctagcaggggcaggcagtatcgcccttagtaatctactgctgggttgc
tctgggcagaatcgccaaacgttaaaactgcgcttgttaaatggctccatgccacctcaa
attgtgggtgcgtatcgtaagcacttacagcaagcgtcgatcgcgggttccttgaagatt
gcaattgagccgcagttgcaggcaacctttgatgcactgcaagcttgggcacgtagcgga
cagccagatccgtctgccaccgatcgctttgattgggtgccatttattggcaaacagtct
aaaccagtgccggatctggtgacgatcggcagctactggcttgagaaggcagtgcagcaa
acgttaattcagccacttgaccccaagcagttggcaggatgggagtcattgccaaccgac
tggaaagcgctagtgacccgcacctcagcgacaaaaacaactgagcagctttggggagcg
ccgtatcgcggtggcagcacggtgattgcttatcgacaggatattttcaaagagaaaggg
ttaccgccgccaaccgattggtcagatctgtggcgatcggacttgcggggacatatttct
ctccttgatcagccacgtgaagtcattggcttgacgctcaaaaaactgggtcaatcttac
aacattgctaatttagagaccgtatcgacgctgccagccgaactaacgtcactgcatcaa
caggtcaagctctatagctccgatgcctacctgcaaccgctcctcatgggtgatacatgg
ctagcggtgggctggtctactgatctcttgccgctaacgcagcgcaaccaaacgctagct
gttgtcgttccaaagtcaggcacagcgctctgggcagatctctgggtgcgtcccgcggct
gcccaggctgaattattctcgctggctgcggattggatcggttttggctggcgaccggac
attgccattcagctctcgcttttgagccggacaatctctccagtcgttttaaccatgccg
ccagccaagctgccagatgagttgcgacaaaatcctgtgctggtaccggatgccaaaacc
caggcagccagcgaatttcttcagcccctcgatcgcgctacggttttgcaatatcaagcg
ctttggcagcgcctccgccaaaaggttggctag
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