Stenomitos frigidus: RBJ76_26950
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Entry
RBJ76_26950 CDS
T10829
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sfri Stenomitos frigidus
Pathway
sfri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBJ76_26950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfri03400
]
RBJ76_26950
Enzymes [BR:
sfri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RBJ76_26950
DNA repair and recombination proteins [BR:
sfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RBJ76_26950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XHX78030
LinkDB
All DBs
Position
5793656..5794573
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AA seq
305 aa
AA seq
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MLYSHEADRIDPLMKVATWNVNSIRTRLNHIVNWLQENPVDVLCLQETKVMDESFPHQPF
TDLGYHTYISGQKSYNGVAMLSREPLSNVSTGFAPLLGEAAIDLDEQKRVITGTLDGIRI
VNLYVPNGSSVGSEKYAYKLRWLAALRDYVQRLGEMGVEAQGSQEAGKQEAVESPSSHLP
PPTSQLTPHTSLLLCGDFNIALDDIDIHDPTGREKMVMATDLERQALQAVLALGFADAFR
KFTTEGGNFSWWDYRSAAFRRNLGWRIDHIYLTPALYERAIACTIDTSPRKLEQPSDHTP
VWVEL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgctgtattctcatgaagccgatcgcattgacccattgatgaaagttgccacctggaac
gttaactccatccgtacccgtctcaaccacattgttaactggttgcaagaaaatccagtt
gatgtattgtgcctgcaagaaacaaaggtcatggatgagagctttccgcaccagcccttc
accgacctcggctaccacacctacatttctgggcagaaaagctacaacggcgttgccatg
ctgagtcgtgagcctctaagtaacgtcagtacaggctttgcaccgctattaggtgaagcc
gcgatcgacctggatgagcaaaaacgagtcatcacaggcaccctcgacggtattcgcatc
gttaacttatacgtgcccaacggctcctcagttggcagcgagaaatatgcctataaactg
cgctggctagccgccttacgagactatgtgcagcgtctgggagagatgggagtagaggcg
caagggagccaggaagcagggaagcaggaggctgtagaatccccctcctcacacctccca
cctcccacctcacagctcacacctcacacctctctcctcctctgcggcgactttaacatc
gccctagacgacatcgacatccatgaccctaccgggcgcgaaaagatggtcatggcaacc
gatctagaacgacaggcgttacaggcagtactggcgttaggctttgccgatgcgtttcgc
aagttcactacagaaggcggcaactttagctggtgggactaccgttcagcagccttccga
cgcaatcttggttggcgcatcgaccacatttatctcaccccagcgttgtacgaaagagcg
atcgcctgcacgatcgacacctctccccgtaagctcgaacagcccagcgaccatacaccc
gtttgggtagaactttag
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