Stenomitos frigidus: RBJ76_27070
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Entry
RBJ76_27070 CDS
T10829
Name
(GenBank) DEAD/DEAH box helicase
Organism
sfri Stenomitos frigidus
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
XHX78050
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Position
complement(5818240..5821767)
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AA seq
1175 aa
AA seq
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MAILHGSWFVHSHAESNTQEAASAGQTAVDRVALSHGYLFLWGEVWRRLTPEMPYAPGLS
ALEATIQPHPFAMVPAELLALLRSRQQTNHLRLPASLLESAAVPGMTVAKAKRSRSTQST
TTLVAHPITTVPGVWQSQTLALPSWVADDALELPAGAIVPQHSAVIERDPTRDRFLYPWR
VEGLCLDPIAAFAFLNALPLGTVDADDSFIGGDLRFWSHAARWSLDLLARSKFLPGLETR
EENGERSLARARWQPLLDSAVDQVRWKQFVDQMPVACRLYEQAANNGGVGEQGWQREPEE
APLPTPHSPLVLPLPMSPQSLIHAFLSSTLDAQIRLLAQRHPLPTSTEKVLSGSVRSWLQ
ALGEEAAIVRVAENAPGLDSLETALANWTAPLQLQGVQQNLFRACLYLHPPQLGQDQWRL
EYFLQAADDETLRVTAPTIWGNPVEQLHYRGRAIDRPQETLLMGLGLASRLYPPIEPSLQ
EPRPQFCSLTALQAYEFIKATAWRLQDSGLGVVLPPSLVNQGGWASRLGLKIQAQSAKLN
KGQVRLGLQSLLNFRWELSIGGQSLSKAEFDRLVALNAPLVEINGEWVELRPQDIRAAQT
FFASRKDQTALSLEDALRISTGDTQTIEKLPVVSFEASGPLQELITTLSGNRQIEALPTP
KNFRGALRPYQSRGVGWLAFLEQWGLGACLADDMGLGKTIQLIAFLLHLKEQKTLEHPTL
LVCPTSVLGNWEREVKKFGPTLTAFLYHGDKRPQGKALAKAVQGNDLVITSYALVSRDIK
DLQPIVWQGIVLDEAQNIKNPDAKQSQAVRQLDAQFRIALTGTPVENRLSELWSILDFLN
PGYLGPKNFFQRRFATPIERYGDTASLQTLRSLVQPFLLRRLKTDRDIIQDLPDKQEMTV
FCGLSSEQASLYQHTVDRSLAEIEAAEGIQRKGIILALLVKLKQICNHPALFLKEDGEKD
KGGESKDKGSRIKDKSSDSNLAFSLNTSAFLARSGKLQRLEEMIEEVVAEGDRALIFTQF
AEWGKLLKAHLERQLGRETLFLYGSTSKKQREEMVDRFQHDPQGPRIFILSLKAGGVGLN
LTRANHVFHFDRWWNPAVENQATDRVFRIGQTKNVQVHKFVCNGTLEEKVHELIESKKAL
AENVIGAGENWLTELDTDSLRDLLLLDRSAIIGDE
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacacggtagctggttcgtccattctcatgcagagagcaacacgcaagag
gcggcaagtgcgggacaaactgctgtcgatcgcgttgctttgtctcatggctacctgttt
ctttggggcgaagtttggcgtaggcttacgcctgagatgccctacgctcctggtttgtct
gcattggaggcgacgatccaacctcaccctttcgccatggtacccgctgaactgctggcg
ctgctgcgatcgcggcaacaaaccaatcacctgcgtctgccagcctcactgttagagtca
gcagccgtgccagggatgacggttgctaaagcgaagcgatcgcgctctacccaaagcaca
actacgctagtggctcaccccattactaccgtgccgggagtgtggcaaagccagacgctg
gcgctaccatcctgggttgcagatgatgccctggagttaccagcaggcgcgatcgtgccg
cagcactctgctgtgatcgaaagggacccgacccgcgatcgctttctctacccctggcgc
gtggaggggctttgccttgatccgatcgcagccttcgctttcctcaatgccctgccacta
ggcactgttgatgcggatgattccttcatcggcggcgatctgcgcttttggtctcatgcc
gcccgctggagtttggacttgctcgcacgatcgaaatttttgccgggactggagacaaga
gaggagaacggcgagaggagtcttgcccgggcacgatggcagccgttgctggatagtgcg
gtggatcaggtgcgatggaagcaatttgtcgatcaaatgcccgtcgcctgtcggctgtat
gagcaagcggcaaacaatggaggtgtaggggagcaggggtggcagcgggaaccagaggaa
gccccactccccactccccactccccactcgtcctcccactccctatgtcgccccagagc
ctcatccatgcctttctcagcagcactctggatgctcagattaggcttttggcgcaacgt
cacccgttaccgacttcaacagaaaaagtgctgtccgggtcagtgcgatcgtggctacag
gcattgggggaagaagcggcgatcgtacgtgtcgctgagaacgcgcctggattagattcc
ctggaaacggcattggcaaactggacagctcccttgcagcttcagggtgtgcagcaaaat
ctgtttcgtgcctgtctctacttgcacccaccccaacttgggcaggatcagtggcgtctg
gaatattttttacaggcagcagacgacgagacgttgcgggtgacagcccccacgatttgg
ggcaatccagtggagcagttgcactatcgtggacgcgcgatcgaccggccacaagaaacg
ctactgatgggtctggggcttgcgtctcgcctgtatccaccgatcgaacccagcttgcaa
gaaccgcgtcctcagttctgctccctgacggcacttcaggcatacgaatttatcaaggca
actgcatggcgcttgcaggatagtggtctgggcgtagtgctgccgccaagtttggttaac
cagggtggctgggcaagtcgtctgggtctaaagattcaggcacagtcggcaaagctcaac
aaaggacaggtgcggctgggtttgcaaagcctgcttaactttcggtgggaactgtctatt
ggcgggcaaagtctttcgaaggcagagttcgatcgcctggttgccctcaatgcaccgcta
gtcgagattaatggtgaatgggtggaactgcgtccccaagacattcgcgctgcccagacc
ttttttgccagccgcaaagaccagactgcgctttcgcttgaagatgcgttacggattagc
acaggcgatactcagacgatcgaaaaactgcctgtcgtcagcttcgaggcgtccggtccc
ttacaagaactcatcaccactctcagcggcaatcggcaaattgaagcactgcccacaccc
aaaaactttcgcggtgccctgcgtccctaccagtcgcgcggcgttggctggctagccttt
ctggagcagtggggcttgggggcttgccttgccgacgatatgggcttgggcaaaaccatt
cagctcattgcctttttactacaccttaaagagcagaaaacactagagcatcccaccttg
ctggtttgcccaacgtccgtgctgggcaactgggagcgtgaggtgaagaagtttgggccc
acgttgacagccttcctgtatcacggcgataagcgaccacaaggcaaggcacttgccaaa
gccgtgcagggtaacgatcttgtcatcaccagctatgccttggtttcgcgcgacatcaag
gacttgcaaccgatcgtgtggcagggcatcgtgctggatgaagcgcaaaacatcaaaaac
cccgatgcaaaacaatcccaggcagtgcggcagcttgacgctcagtttcgcatcgcgctg
acaggcaccccggtcgaaaatcgcctgtctgaactgtggtcaatcctggattttctcaat
cctggctacctgggacccaaaaatttcttccagcgtcgctttgctaccccgatcgagcgc
tacggcgatacagcctccctgcaaaccctgcgatcgctcgtgcaaccctttctgctccgt
cgtcttaagaccgatcgcgacattattcaagacctacccgataagcaggaaatgaccgtc
ttctgtgggttgtcgtctgagcaagcctccctctaccagcacaccgtcgatcgctccctc
gccgaaatcgaagctgccgaaggcatccagcgcaaagggatcattctggcgctgctagtg
aagctaaagcaaatttgcaatcatccagcgctttttctcaaagaagacggagaaaaggat
aaaggtggggagagcaaggataaaggctcaaggataaaggacaaaagcagtgatagtaat
ttagcctttagccttaatacttcagcctttctcgcccgctctggtaagcttcagcggtta
gaagaaatgatcgaagaagtggtagcagaaggcgatcgcgccctcatcttcacccagttt
gccgaatggggcaagctactaaaagctcatctcgaacgccagttgggacgcgaaacgttg
tttctttacggcagcacgtctaagaagcagcgtgaagaaatggtcgatcgctttcagcat
gacccgcaaggaccacgcatttttatcctgtcgctgaaagcaggcggtgtcggcttaaac
ctgactcgcgccaatcacgttttccacttcgatcgctggtggaatcccgctgtggaaaat
caggcaaccgatcgcgtcttccgtattgggcaaacgaagaatgtgcaggtacacaaattt
gtctgcaacggcacccttgaagagaaagtgcatgaactaatcgaaagcaaaaaagcactg
gcagaaaacgtcatcggcgcaggcgaaaactggcttacagagttagataccgatagtttg
cgagatctattgctgctcgatcgtagcgccattatcggtgacgaataa
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