Stenomitos frigidus: RBJ76_28560
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Entry
RBJ76_28560 CDS
T10829
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sfri Stenomitos frigidus
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfri03032
]
RBJ76_28560 (gyrA)
03400 DNA repair and recombination proteins [BR:
sfri03400
]
RBJ76_28560 (gyrA)
Enzymes [BR:
sfri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RBJ76_28560 (gyrA)
DNA replication proteins [BR:
sfri03032
]
Prokaryotic type
DNA Topoisomerases
RBJ76_28560 (gyrA)
DNA repair and recombination proteins [BR:
sfri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBJ76_28560 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MTBP_mid
Motif
Other DBs
NCBI-ProteinID:
XHX78330
LinkDB
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Position
6150732..6153374
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AA seq
880 aa
AA seq
DB search
MTFSQDTPNDRIVPTDLRNEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMHELG
LSPDRPFRKCARVVGDVIGKYHPHGDTAVYDALVRMAQDFSMRSPLINGHGNFGSVDNDP
PAAMRYTECRLQSLTTDALLQDIEAETVDFGANYDGSQQEPLVMPARIPQLLLNGSSGIA
VGMATNIPPHNLGELIDGLTALIANPDLTDQELMQYIPGPDFPTGAQILGRTGIREAYTT
GRGSIIMRGVAQMETIEHRGRPDREAIIITELPYQTNKAALIEKIAEMVNEQRLEGISDI
RDESDRDGMRIVIELKRDAYPRVVLNNLYKQTPLQANFGANMLALVNREPQLLTLKYFLE
VFLDFRIEAITRRTRYYLRKAEERDHLLQGLLIALGNLDGIINLIRHAADAPTAKQELID
TYGLSEPQADAILQMQLRRLTALEAEKIQREHEDLQIQIADLRDILERRERILEIIVTEI
TEIRAKHATPRRTIIEQSEDELGDIDLIANEKAVILLTEQGYLKRMPVNTFESQSRATRG
KAGARMKDDDGVEHFLTCCDHDSVLFFSDRGVVYALKAYQIPVGSRTSRGTPIVQMLPIP
REEKITAFISVAEFSADEYLVMLTRNGYIKKTALTAFSNIRANGLIAISLEDGDALRWVR
RARVDDSIIVGSSLGRSIHFRANHEQLRPLGRATRGVRSMSLREGDRLVGMDILPSQIVA
DLVQVLESDAEPDVEELNGELLESGETGEGDQPSTASGQLGPWILVVTMGGYGKRVPVSQ
FRLQNRAGMGLVATKFRKKGDRLAALHIVNEGAELMMVTNRGIIIRQSVDAISSQSRTAT
GVRVQRLDEDDAIAAVALVPPSTGEDIGLLEESADEEQAE
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgactttttcccaggatacccctaacgatcggattgttcctaccgacttgcggaacgag
atgtctcgatcgtacctggaatacgcgatgagcgtcatcgtgggacgagcgcttcccgat
gcgcgtgatggtttgaaaccagtgcatcgtcgcattctttacgccatgcacgaattgggc
ttatcacccgatcgtccctttcgtaaatgcgcccgcgtcgtcggggatgtcattggtaaa
taccatccgcacggcgatacagcggtctatgacgcattggtgcggatggcgcaagatttc
tccatgcgatcgcccctcatcaacgggcacggcaactttggttccgtagacaacgatccg
cctgcggcaatgcggtacaccgaatgtcgcttgcagtcgctcaccaccgatgccctcctg
caagatatcgaagcggaaaccgttgactttggcgcaaactacgacgggtcgcagcaagaa
ccactggtgatgcctgcccgcattcctcaactgttgctgaacgggtcgtcgggtattgca
gtgggcatggcgacgaatattccaccgcacaacctgggcgaactgatcgatggtcttacc
gcactgattgccaatcccgatctgacggatcaggagttgatgcagtacattcctggtcct
gacttccctacaggcgcacaaatccttggcaggacgggcattcgtgaggcgtatacgacc
gggcgtggttccatcatcatgcggggtgtggcacagatggaaacgatcgagcatcggggt
cgtcccgatcgtgaagccatcatcatcaccgagttgccctatcagacgaataaagccgcg
ctgattgagaaaattgccgaaatggtaaacgagcagcggctagaaggcatttcggatatt
cgggatgagagcgatcgtgatgggatgcgaatcgtcattgaactgaagcgcgatgcctac
ccccgcgttgtacttaacaacctctataagcaaacaccgctacaggcaaactttggcgcg
aatatgctagcgctggtcaaccgcgaaccgcagctcctgacgctgaagtacttcctggaa
gtatttcttgacttccgcattgaagccatcacacgccgtactcgctactatctgcgcaaa
gccgaagagcgtgatcacctcttgcagggtttgctgattgcactcggaaacctggatggc
attatcaacttgattcgccatgccgctgatgcaccgaccgcaaagcaagaactcattgat
acgtatggactttcagaaccgcaagctgatgccattctgcaaatgcagcttcgccgtctg
accgctctggaagccgaaaaaattcaacgtgaacatgaagatctgcaaattcagattgcc
gatttgcgcgatattctagagcgccgtgagcgcattctcgaaatcattgtcaccgaaatc
accgaaattcgcgctaaacacgccacgccacgtcgcaccatcattgaacaatcggaagat
gaactgggtgacattgacctgattgcaaatgagaaagccgtcattctgctgaccgagcaa
ggctacctgaagcggatgcctgtcaacacgtttgaatcgcaaagtcgcgctacgcgaggc
aaagcgggtgcccgtatgaaggatgatgacggggtggagcattttctcacctgctgtgac
cacgatagcgtgctgttcttcagcgatcgtggcgttgtttatgcgctcaaggcataccag
attcccgtcgggtcgcgcacgtcacggggcacgccgatcgtgcaaatgctgccgattccg
cgcgaagaaaaaatcactgcttttatttccgttgctgaattcagcgccgatgaatacctg
gtcatgctgacccgcaacggttacatcaaaaaaaccgcgctgacggcgttcagcaatatt
cgtgccaatggattaattgcaatctcactggaagacggcgatgcacttcgttgggtacgc
cgtgcccgtgtggacgacagcattatcgtgggttccagcttgggtcgatcgatccacttc
cgtgcgaaccacgaacagttgcgtcccctcggtcgggctacaagaggtgtgcgatcgatg
tcgctgcgtgagggcgatcgcttagttggcatggacattctacccagtcaaatcgtggct
gatctggtgcaagttctggaatccgatgcggaaccggatgttgaagaattgaatggcgaa
ctgctggagtctggggaaaccggagaaggcgatcaaccctcaacagccagtggtcaattg
ggaccgtggattttagttgtgacgatgggcggctatggtaagcgcgtgccagtatctcaa
ttccgcttgcagaaccgtgcgggcatggggttggttgctaccaagtttcgcaaaaagggc
gatcggctggcggcgctccatatcgtcaatgaaggcgcagaactgatgatggtaacaaac
cggggcatcattattcgccagtcagttgatgccatctcatcccaatcgcgtacagcaaca
ggtgtgcgcgttcagcggttggatgaagacgacgcgatcgccgctgtggcgctcgtgccg
ccttctacaggtgaggatatagggctgcttgaagagtctgctgacgaagagcaagcagaa
taa
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