Shigella flexneri Shi06HN006 (serotype Yv): SFyv_0154
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Entry
SFyv_0154 CDS
T03315
Name
(GenBank) AcnB
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00020
Citrate cycle (TCA cycle)
sfs00630
Glyoxylate and dicarboxylate metabolism
sfs00640
Propanoate metabolism
sfs00720
Other carbon fixation pathways
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
sfs01120
Microbial metabolism in diverse environments
sfs01200
Carbon metabolism
sfs01210
2-Oxocarboxylic acid metabolism
sfs01230
Biosynthesis of amino acids
Module
sfs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sfs_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sfs_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SFyv_0154
00630 Glyoxylate and dicarboxylate metabolism
SFyv_0154
00640 Propanoate metabolism
SFyv_0154
09102 Energy metabolism
00720 Other carbon fixation pathways
SFyv_0154
Enzymes [BR:
sfs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
SFyv_0154
4.2.1.99 2-methylisocitrate dehydratase
SFyv_0154
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase_B_N
Aconitase
Motif
Other DBs
NCBI-ProteinID:
AIL38953
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Position
129417..131936
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AA seq
839 aa
AA seq
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MAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKA
IELLGTMQGGYNIHPLIDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQV
MQSWADAEWFLNRPALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAR
EGIEPDQPGVVGPIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPN
KRGGGLCLGGKIAPIFFNTMEDAGALPIEVNVSNLNMGDVIDVYPYKGEVRNHETGELLA
TFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQ
KMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTA
AYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGI
SFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLSSNIVL
LKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLAEIKEPILCAPN
DPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPPTRMDAA
QLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVFLA
SAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKADGVIFQTAV
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcttgtagagctgctgaaaaacccgcccgcgggcgaagaagaattcctgtta
gatctgttaaccaaccgtgttcccccaggcgtcgatgaagccgcctatgtaaaagcaggc
ttcctggctgctatcgctaaaggcgaagctaaatcccctctgctgactccggaaaaagct
atcgaactgctgggcaccatgcagggtggttacaacattcatccgctgatcgacgcgctg
gatgatgccaaactggcacctattgctgccaaagcactttctcacacgctgctgatgttc
gataacttctatgacgtagaagagaaagcgaaagcaggcaacgaatatgcgaagcaggta
atgcagtcctgggcggatgccgaatggttcctgaatcgcccggcgctggctgaaaaactg
accgttaccgtctttaaagtcactggcgaaaccaacaccgatgacctttctccggcaccg
gatgcgtggtcacgcccggatatcccactgcacgcgctggcgatgctgaaaaacgcccgt
gaaggtattgagccagaccagccaggtgttgttggcccgatcaaacagattgaagctctg
caacagaaaggtttcccgctggcgtacgtcggtgacgttgtgggtacgggttcatcgcgt
aaatccgccacgaactccgttctgtggtttatgggcgatgatattccacatgtgccgaac
aaacgcggcggtggtttgtgcctcggcggtaaaattgcacccatcttctttaacacgatg
gaagacgcgggtgcactgccaatcgaagtcaacgtctctaacctgaacatgggcgacgtg
attgacgtttacccgtacaaaggtgaagtgcgtaaccacgaaacaggcgaactgctggcg
accttcgaactgaaaaccgacgtgctgattgatgaagtgcgtgctggcggccgtattccg
ctgattatcgggcgtggcctgaccaccaaagcgcgtgaagcacttggtctgccgcacagt
gatgtgttccgtcaggcgaaagatgtcgctgagagcgatcgcggcttctcgctggcgcag
aaaatggtaggccgtgcctgtggcgtgaaaggcattcgtccgggcgcgtactgcgaaccg
aaaatgacttctgtaggctctcaggacaccaccggcccgatgacccgtgatgaactgaaa
gacctggcgtgcctgggcttctcggctgacctggtgatgcagtctttctgccacaccgcg
gcgtatccgaagccagttgacgtgaacacgcaccacacgctgccggacttcattatgaac
cgtggcggtgtgtcgctgcgtccgggtgacggcgtcattcactcctggctgaaccgtatg
ctgctgccggataccgtcggtaccggtggtgactcccatacccgtttcccgatcggtatc
tctttcccggcgggttctggtctggtggcgtttgctgccgcaactggcgtaatgccgctg
gatatgccggaatccgttctggtgcgcttcaaaggcaaaatgcagccgggcatcaccctg
cgcgatctggtacacgccattccgctgtatgcgatcaaacaaggtctgctgaccgttgag
aagaaaggcaagaaaaacatcttctctggtcgcattctggaaattgaaggtctgccggat
ctgaaagttgagcaggcctttgagctaaccgatgcgtccgccgagcgttctgccgctggt
tgtactatcaagctgaacaaagaaccgatcatcgaatacctgagctccaacatcgtcctg
ctgaagtggatgatcgcggaaggttacggcgatcgtcgtaccctggaacgccgtattcag
ggcatggaaaaatggctggcgaatcctgagctgctggaagccgatgcagatgcggaatac
gcggcagtgatcgacatcgatctggcggagattaaagagccaatcctgtgtgctccgaac
gatccggatgacgcacgtccgctgtctgcggtacagggcgagaagatcgacgaagtattt
atcggttcttgcatgactaacatcggtcacttccgtgccgctggtaaactgctggatgcg
cacaaaggtcagttgccgacccgcctgtgggtggcaccgccaacccgtatggacgccgcg
caactgacggaagaaggctactacagcgtcttcggtaagagcggggctcgtatcgagatc
ccgggctgttccctgtgtatgggtaaccaggcgcgtgtagcagacggtgcgacggtggtt
tccacctctacccgtaacttcccgaaccgtttgggtactggcgcgaatgtcttcctggct
tctgcagaactggcggctgttgcggcgctgattggcaaactgccgacgccggaagagtac
cagacctacgttgcgcaagtagataaaactgccgttgatacttatcgttatctgaacttc
aaccagctttctcagtacaccgaaaaagccgatggggtgattttccagactgcggtgtaa
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