Shigella flexneri Shi06HN006 (serotype Yv): SFyv_0480
Help
Entry
SFyv_0480 CDS
T03315
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00730
Thiamine metabolism
sfs00900
Terpenoid backbone biosynthesis
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
Module
sfs_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SFyv_0480
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SFyv_0480
Enzymes [BR:
sfs01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
SFyv_0480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AIL39210
LinkDB
All DBs
Position
complement(367169..369031)
Genome browser
AA seq
620 aa
AA seq
DB search
MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELT
VALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSV
GHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLND
NEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPG
TLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA
VPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFP
DRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDR
AGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGN
AVGVELTPLEKLPIGKGIVKRRGEKLVILNFGTLMPETAKVAESLNATLVDMRFVKPLDE
ALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEM
RAELGLDAAGMEAKIKAWLA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgatattgccaaatacccgaccctggcactggtcgactccacccaggagtta
cgactgttgccgaaagagagtttaccgaaactctgcgacgaactgcgccgctatttactc
gacagcgtgagccgttccagcgggcacttcgcctccgggctgggcacggtcgaactgacc
gtggcgctgcactatgtctacaacaccccatttgaccaattgatttgggatgtgggacat
caggcttatccgcataaaattttgaccggacgccgcgacaaaatcggcaccatccgtcag
aaaggcggtctgcacccgttcccgtggcgcggcgaaagcgaatatgacgtattaagcgtc
gggcattcatcaacctccatcagtgccggaattggtattgcggttgctgccgagaaagaa
ggcaaaaatcgccgcaccgtctgtgtgattggcgacggcgcgattaccgctggcatggcg
tttgaagcgatgaatcacgcgggcgatattcgtcctgatatgctggtggtcctcaacgac
aatgaaatgtcgatttccgaaaatgttggcgcgcttaacaaccatctggctcagctgctt
tccggtaagctttactcttcactgcgcgaaggcgggaaaaaagttttctctggcgtgccg
cccattaaagagctgctcaaacgtaccgaagaacatattaaaggcatggtggtgcctggc
acgttgtttgaagagctgggatttaactacatcggcccggtggacggtcacgatgtgctg
gggcttatcaccacgctaaagaacatgcgcgacctgaaaggcccgcagttcctgcatatc
atgaccaaaaaaggtcgtggttatgaaccggcagaaaaagacccgatcactttccacgcc
gtgcctaaatttgatccctccagcggttgtttgccgaaaagtagcggcggtttgccgagc
tattcaaaaatctttggcgactggttgtgcgaaacggcagcgaaagacaacaagctgatg
gcgattactccggcgatgcgtgaaggttccggcatggtcgagttttcacgtaaattcccg
gatcgttacttcgacgtggctattgccgagcaacacgcagtgacctttgccgccggtctg
gcgattggtggatacaaacccattgtcgcgatctactccaccttcctgcaacgcgcctat
gatcaggtgctgcatgacgtggcaattcaaaagctaccggtcctgttcgccattgaccgc
gcgggcattgttggtgctgacggtcaaactcaccagggcgcttttgatctctcttacctg
cgctgcataccagaaatggtcattatgaccccgagcgatgaaaacgaatgtcgccagatg
ctctataccggctatcactataacgatggcccgtccgcggtgcgctacccgcgcggcaac
gcggttggcgtggaactgacgccgctggaaaaactaccaattggcaaaggcattgtgaag
cgtcgtggcgagaaactggtgatccttaactttggtacgctgatgccagaaacggccaaa
gtcgccgaatcgctgaacgctacgctggtcgatatgcgttttgtgaaaccacttgatgaa
gcgttaattctggaaatggccgccagccatgaagcgctggtcaccgtagaagaaaacgcc
attatgggcggcgcaggtagcggagtgaacgaagtgctgatggcccatcgtaaaccagta
cccgtgctgaacattggcctgccggacttctttattccgcaaggaactcaggaagaaatg
cgcgccgaactcggcctcgatgccgccggtatggaagccaaaatcaaggcctggctggca
taa
DBGET
integrated database retrieval system
