Shigella flexneri Shi06HN006 (serotype Yv): SFyv_1178
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Entry
SFyv_1178 CDS
T03315
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sfs03110
]
SFyv_1178
Chaperones and folding catalysts [BR:
sfs03110
]
Heat shock proteins
HSP100
SFyv_1178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
Sigma54_activat
AAA_16
AAA_22
TniB
ResIII
RuvB_N
TIP49
AAA_14
AAA_7
AAA_18
nSTAND3
AAA_3
AAA_6
IstB_IS21
TsaE
bpMoxR
AAA_33
NACHT
Rad17
IPT
Motif
Other DBs
NCBI-ProteinID:
AIL39746
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Position
871372..873648
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AA seq
758 aa
AA seq
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MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA
FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA
AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA
RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM
ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ
VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING
LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT
VNVADIESVVARIARIPEKSVSQSDRDTLKKLSDRLKMLVFGQDKAIEALTEAIKMARAG
LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY
VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV
LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ
VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL
LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatcaagaactggaactcagtttaaatatggctttcgccagagcgcgcgagcac
cgtcatgagtttatgaccgtcgagcacttgttactggcgctgctcagtaacccatctgcc
cgggaggcgctggaagcgtgttctgtggatttggttgcgctccgtcaggaactggaagcc
tttattgaacaaaccacacccgttctgcctgccagtgaagaggagcgcgacacacagccg
acgctgagttttcagcgtgtactgcaacgtgcggtcttccatgtccagtcctccggtcgc
aatgaggttaccggtgcaaacgttctggtcgctatcttcagcgaacaggagtcgcaggcg
gcatatctgttgcgtaaacatgaagtcagccgtctcgatgtggtgaactttatctctcat
ggcacgcgtaaagacgagccgacacagtcttctgatcctggcagccagccaaacagcgaa
gaacaagctggtggggaggaacgtatggagaatttcacgacgaacctgaaccagcttgcg
cgtgtgggcggaatcgacccactaattggtcgtgagaaagagctggagcgtgctattcag
gttctctgccgtcgccgtaaaaacaacccgctgctggtgggggaatctggtgtcggtaaa
accgcgattgcagaaggtcttgcctggcgaattgttcagggtgatgtgccggaagtgatg
gctgactgtacgatttactctctcgatatcggttctctgttagcgggcacaaaatatcgc
ggcgactttgaaaaacgttttaaagcgttgctcaagcagctggagcaggacactaacagc
atcctgtttattgatgagatccacaccattatcggtgcgggtgcagcgtctggtggtcag
gtcgatgcggctaacctaatcaaaccgttgctctccagcggtaaaattcgcgtaattggt
tcgacaacctatcaggagttcagcaacattttcgagaaagaccgtgctctggcgcgtcgc
ttccagaaaattgatattactgaaccgtcgatcgaagaaactgttcaaatcatcaatggc
ctgaaaccgaagtatgaagcgcaccacgacgtgcgttataccgcaaaagcggtgcgtgcg
gcggtagagctggcggtgaaatacattaacgatcgtcatctgccggataaagccattgat
gttatcgacgaagcaggcgctcgcgcacgtctgatgccggtaagcaaacgcaagaaaacc
gttaatgtggcggatattgagtccgtggtggcccgtattgcacgcattccagagaagagt
gtttctcagagtgaccgcgataccctgaaaaaactcagcgatcgcctgaaaatgctggtc
ttcggccaggataaagccattgaggcgctgactgaagccattaagatggcgcgtgcaggt
ttaggtcacgaacataaaccggtcggttcgttcctgtttgccggtcctaccggggtcggg
aaaacagaggtgacggtacagctttcgaaagcgttgggcattgagcttctgcgctttgat
atgtccgagtatatggaacgccataccgtcagccgtctgattggtgcgcctccgggatac
gttggttttgatcagggcggtttgctgaccgatgcggtaatcaagcatccacatgcggtg
ctgctgctggacgaaatcgagaaagcgcatccggacgtgttcaatattctgttgcaggtg
atggacaacggtacgctgaccgataacaacggacgcaaagcggacttccgtaacgtggtg
ctggtgatgaccactaacgccggggtacgggaaactgagcgcaaatccattggtcttatc
caccaggataacagcaccgatgcgatggaagagatcaagaagatctttacaccggaattc
cgtaaccgtctcgacaacattatctggttcgatcatctgtcaactgacgtgatccatcag
gtggtggataaattcatcgtcgagttgcaggttcagctggatcagaaaggtgtttctctg
gaagtgagccaggaagcgcgtaactggctggccgagaaaggttacgaccgggcaatgggc
gcacgtccgatggcgcgtgtcatccaggacaacctgaaaaaaccgctcgccaacgaactg
ctgtttggttcgctggtggacggcggtcaggtgacggttgcgctggataaagagaaaaat
gagctgacttacggattccagagtgcacaaaagcacaaggcggaagcagcgcattaa
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