Shigella flexneri Shi06HN006 (serotype Yv): SFyv_1496
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Entry
SFyv_1496 CDS
T03315
Name
(GenBank) protein TnpA
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_Tn3
DUF4158
Motif
Other DBs
NCBI-ProteinID:
AIL39991
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Position
1099748..1102714
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AA seq
988 aa
AA seq
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MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRGPANRLGFAVQLCYLRF
PGVILGVDELPFPPLLKLVADQLKVGVESWNEYGQREQTRREHLSELQTVFGFRPFTMSH
YRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALNAVERASAEAITRANRRIYDA
LAEPLADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPT
GIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALATEGMATVTDEIIDLHDRI
LGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIGQALIDAKQSGRDAFAAIEAVMSWDSF
AESVTEAQKLAQPDDFDFLHRIGESYATLRRYAPEFLAVLKLRAAPAAKNVLDAIEVLRG
MNTDNARKLPADAPTGFIKPRWQKLVMTDAGIDRRYYELCALSELKNSLRSGDIWVQGSR
QFKDFEDYLVPPEKFTSLKQSSELPLAVATDCEQYLHERLTLLEAQLATVNRMAAANDLP
DAIITESGLKITPLDAAVPDTAQALIDQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKS
GDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVN
AQFRHPFAGHWGDGTTSSSDGQNFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFH
TKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLG
DTKLYIPKGDAAYDALKPMIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSY
PRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEI
RDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWEHI
NLTGDYLWRSSAKIGAGKFRPLRPLQPA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtcgttccatcctgtccgccgccgagcgggaaagcctgctggcgttgccggac
tccaaggacgacctgatccgacattacacattcaacgataccgacctctcgatcatccga
cagcggcgcgggccagccaatcggctgggcttcgcggtgcagctctgttacctgcgcttt
cccggcgtcatcctgggcgtcgatgaactaccgttcccgcccttgttgaagctggtcgcc
gaccagctcaaggtcggcgtcgaaagctggaacgagtacggccagcgggagcagacccgg
cgcgagcacctgagcgagctgcaaaccgtgttcggtttccggcccttcaccatgagccat
taccggcaggccgtccagatgctgaccgagctggcgatgcaaaccgacaaaggcatcgtg
ctggccagcgccttgatcgggcacctgcggcggcagtcggtcattctgcccgccctcaac
gccgtcgagcgggcgagtgccgaggcgatcacccgtgctaaccggcgcatctacgacgcc
ttggccgaaccactggcggacgcgcatcgccgccgcctcgacgatctgctcaagcgccgg
gacaacggcaagacgacctggttggcttggttgcgccagtctccggccaagccaaattcg
cggcatatgctggaacacatcgaacgcctcaaggcatggcaggcactcgatctgcctacc
ggcatcgagcggctggttcaccagaaccgcctgctcaagattgcccgcgagggcggccag
atgacacccgccgacctggccaaattcgagccgcaacggcgctacgccactctcgtggcg
ctggccaccgagggcatggccaccgtcaccgacgaaatcatcgacctgcacgaccgcatc
ctgggtaagctgtttaacgctgccaagaataagcatcagcagcagttccaggcgtcaggc
aaggccatcaacgccaaggtacgtctgtacgggcgcatcggtcaggcgctgatcgacgcc
aagcaatcaggccgcgatgcgtttgccgccatcgaggccgtcatgtcctgggattccttt
gccgagagcgtcaccgaggcgcagaagctcgcgcaacccgatgacttcgatttcctgcat
cgcatcggcgagagctacgccaccctgcgccgctatgcaccggaattccttgccgtgctc
aagctgcgggccgcgcccgccgccaaaaacgtgcttgatgccattgaggtgctgcgcggc
atgaacaccgacaacgcccgcaagctgccagccgatgcaccgaccggcttcatcaagccg
cgctggcagaaactggtgatgaccgacgccggcatcgaccggcgctactacgaactgtgc
gcgctgtccgagttgaagaactccctgcgctcgggcgacatctgggtgcagggttcacgc
cagttcaaggacttcgaggactacctggtaccgcccgagaagttcaccagcctcaagcag
tccagcgaattgccgctggccgtggccaccgactgcgaacaatatctgcatgagcggctg
acgctgctggaagcacaacttgccaccgtcaaccgcatggcggcagccaacgacctgccg
gatgccatcatcaccgagtcgggcttgaagatcacgccgctggatgcggcggtgcccgac
accgcgcaggcgctgatagaccagacagccatggtcctgccgcacgtcaagatcaccgaa
ctgctgctcgaagtcgatgagtggacgggcttcacccggcacttcacgcacttgaaatcg
ggcgatctggccaaggacaagaacctgttgttgaccacgatcctggccgacgcgatcaac
ctgggcctgaccaagatggccgagtcctgccccggcacgacctacgcgaagctcgcttgg
ctgcaagcctggcatacccgcgacgaaacgtactcgacagcgttggctgaactggtcaac
gctcagtttcggcatccctttgccgggcactggggcgatggcaccacatcatcatcggac
ggacagaatttccgaaccgctagcaaggcaaagagcacggggcacatcaacccaaaatat
ggcagcagcccaggacggactttctacacccacatctccgaccaatacgcgccattccac
accaaggtggtcaatgtcggcctgcgcgactcaacctacgtgctcgacggcctgctgtac
cacgaatccgacctgcggatcgaggagcactacaccgacacggcgggcttcaccgatcac
gtcttcgccctgatgcacctcttgggcttccgcttcgcgccgcgcatccgcgacctgggc
gacaccaagctctacatcccgaagggcgatgccgcctatgacgcgctcaagccgatgatc
ggcggcacgctcaacatcaagcacgtccgcgcccattgggacgaaatcctgcggctggcc
acctcgatcaagcagggcacggtgacggcctcgctgatgctcaggaaactcggcagctac
ccgcgccagaacggcttggccgtcgcgctgcgcgagttgggccgcatcgagcgcacgctg
ttcatcctcgactggctgcaaagcgtcgagctacgccgccgcgtgcatgccgggctgaac
aagggcgaggcgcgcaatgcgctggcccgtgccgtgttcttcaaccgccttggtgaaatc
cgtgaccgcagtttcgagcagcagcgctaccgggccagcggcctcaacctggtgacggcg
gccatcgtgctgtggaacacggtctacctggagcgtgcggcgcatgcgttgcgcggcaat
ggtcatgccgtcgatgactcgctattgcagtacctgtcgccactcggctgggagcacatc
aacctgaccggtgattacctatggcgcagcagcgccaagatcggcgcggggaagttcagg
ccgctacggcctctgcaaccggcttag
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