Shigella flexneri Shi06HN006 (serotype Yv): SFyv_2323
Help
Entry
SFyv_2323 CDS
T03315
Name
(GenBank) Autoinducer 2 import ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs02010
ABC transporters
sfs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SFyv_2323
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFyv_2323
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfs02000
]
SFyv_2323
Transporters [BR:
sfs02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
SFyv_2323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
AAA_23
AAA_30
MukB
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AIL40647
LinkDB
All DBs
Position
1654760..1656295
Genome browser
AA seq
511 aa
AA seq
DB search
MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGI
TPADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQK
MKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLF
SRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELSTDDIIQAITPAV
REKSLSASQKLWLELPGNRPQHAVGTPVLTLENLTGEGFRNVSLTLNAGEILGLAGLVGA
GRTELAETLYGLRTLRGGRIMLNGKEINKLSTGERLLRGLVYLPEDRQSSGLNLDASLAW
NVCALTHNLRGFWAKTAKDNATLERYRRALNIKFNQPEQAARTLSGSNQQKILIAKCLEA
SPQALIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLFISSDMEEIELMADRVYVMHQGE
ITHSALTGRDINVETIMRVAFGDSQRQEASC
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgagtgatacccgcgcgttaccgctactttgcgcccgctcggtttataaacag
tattcaggggtcaatgtcctgaaaggcatcgattttacgttgcatcagggggaggtccac
gccctgctcggcggcaatggtgccggtaaatcgacgttaatgaagattattgccggtatt
acccctgctgatagcggtacgctggagattgggggcaacaactacgccagattaacgcca
gttcatgctcatcagctgggcatttatctcgttccccaggaaccgctgcttttcccaagc
ctgtcgataaaagaaaacatcctgtttgggctggcaaaaaaacagctctccatgcagaaa
atgaagaacttgctggcggcgctgggctgccagtttgatctgcatagtctggcaggatcg
ctggatgtcgccgatcgccaaatggtggaaatcctccgcgggctgatgcgcgactcgcgg
attctgatcctcgatgaacctaccgcctcgcttacccctgcggaaaccgaacgcttgttt
agtcgcttgcaagagctgcttgctactggcgtgggtattgtttttatctcgcataagctg
ccggaaattcgccagattgccgatcgaattagcgtgatgcgcgacggaaccatcgcctta
agcggcaaaaccagcgaactgtctaccgacgacattattcaggccatcaccccagcggta
cgggaaaaatcgctctctgccagccaaaaattatggctggagttacctggtaaccgccca
caacatgccgtcggaacgccggtgctgacactggaaaatctgactggcgaaggcttcagg
aatgtcagcctgacgctcaatgccggagaaattctgggcctggctgggctggtgggagcc
ggacgcacagaactggccgagacgctctatggtctgcgtactttgcgtggcggacgcatt
atgctgaatggtaaagagatcaataaattatccactggagaacgtttactgcgcggtctg
gtttatctgccggaagatcgccagtcatccggactgaatctcgatgcttcgctggcctgg
aacgtctgcgcccttactcataaccttcgtggattctgggcgaaaaccgcgaaagataat
gccaccctggaacgttatcgtcgggcgctgaatattaaatttaaccaaccggaacaagct
gcacggacattatccggtagcaaccagcaaaaaatcctcattgccaaatgcctggaagct
tcgccgcaagcattgattgtcgatgagccgacgcgcggcgtggatgtctcggcccgtaat
gatatctaccagctgttgcgcagcatcgccgcacagaatgtggctgtgctgtttatctcc
tctgatatggaagagatcgaactgatggcagatcgtgtgtatgtgatgcatcagggcgaa
attacccactctgcactgaccgggcgcgatattaatgtcgagactattatgcgcgttgcc
ttcggcgatagtcagcgtcaggaggcatcatgctga
DBGET
integrated database retrieval system
