Shigella flexneri Shi06HN006 (serotype Yv): SFyv_2717
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Entry
SFyv_2717 CDS
T03315
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SFyv_2717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfs03400
]
SFyv_2717
DNA repair and recombination proteins [BR:
sfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SFyv_2717
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
AIL40960
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Position
1929354..1930016
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AA seq
220 aa
AA seq
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MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSLLVRPDRPISPQAMAIHRITEAMVAD
KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGLKYSNMALYKT
RKLNVQTPLGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR
GKAVSDVAERYPGYLRWLFNNLDSMSPELRLTLKHYLENT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcattatcgatacagaaacctgcggtttgcagggagggatcgttgagattgcc
tctgttgatgtcattgacggaaaaatcgtcaaccccatgagcctcctggtgcgccccgat
cgtcctattagtccacaagcgatggcgattcatcgcatcaccgaagccatggtcgccgat
aaaccgtggattgaagatgtgatcccacactattacggtagtgaatggtatgtcgcgcac
aacgccagctttgaccgccgcgtactgcctgagatgcccggtgagtggatttgcactatg
aaactggcccgtcgtttgtggccagggctcaagtacagcaatatggcgttatataaaaca
cgcaagctcaatgtacagacaccgctgggcctgcatcatcaccgcgcgttgtatgactgt
tatatcaccgccgcgttgcttatcgatattatgaacacctccggctggacggcagaacag
atggccgatatcaccggacgtccgtcgttgatgacaaccttcacctttggcaaataccgt
ggcaaagcggtttccgacgttgccgaacgctatccgggctatctgcgctggttatttaat
aacctggacagcatgagcccggagctgcgtttaacactgaaacattatctggaaaatact
taa
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