Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3054
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Entry
SFyv_3054 CDS
T03315
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00521
Streptomycin biosynthesis
sfs00523
Polyketide sugar unit biosynthesis
sfs00541
O-Antigen nucleotide sugar biosynthesis
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
sfs01250
Biosynthesis of nucleotide sugars
Module
sfs_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SFyv_3054
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SFyv_3054
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SFyv_3054
Enzymes [BR:
sfs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SFyv_3054
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AIL41229
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Position
complement(2154497..2155042)
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AA seq
181 aa
AA seq
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MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKSTKGVLRG
LHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHG
FCVLSDEAEFVYKTNNFYSKMQERGILWSDKSINIEWPVQNPLLSDKDINGQKFVDADYF
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattaaaactgaaattcctgatgtgctaatttttgaaccaaaagtatttggt
gatgagcggggcttttttatggaaagcttcaatcagaaagttttcgaagaggctgtagga
cgaaaggttgagtttgttcaggataaccattctaaatcaactaagggtgtgttacgcgga
ctgcactatcagctggaaccttatgctcaaggaaaactggtacgctgtgttgtcggtgaa
gtttttgacgtagctgttgatattcggaaatcatcaccaacatttggcaagtgggttggt
gtaaatttgtcggcggagaataagcgtcaattatggataccggaaggattcgctcatggg
ttttgcgttcttagtgatgaagcagaatttgtctacaaaacaaataatttctattcaaaa
atgcaagagcgtgggattttatggagcgacaaaagtataaatatagaatggccggttcaa
aatccattgctttctgataaagatattaatggtcaaaaatttgtagatgctgattatttt
atatga
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