Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3082
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Entry
SFyv_3082 CDS
T03315
Name
(GenBank) WcaC
KO
K13684
putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
SFyv_3082
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sfs01003
]
SFyv_3082
Glycosyltransferases [BR:
sfs01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SFyv_3082
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GFIT
Motif
Pfam:
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Motif
Other DBs
NCBI-ProteinID:
AIL41250
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Position
complement(2175490..2176707)
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AA seq
405 aa
AA seq
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MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP
RMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLNSVVRFCEKV
KNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK
RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL
MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQ
LVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaatattctgcaatttaatgtgcgactggcggaaggcggggcagcaggtgtggcgtta
gatctccaccagcgtgcgctgcaacaggggctggcgtcacattttgtctacggctacggc
aaaggcggcaaagagagcgtcagccatcagaactatccgcaggtcatcaaacatacgccg
cggatgaccgcgatggcgaacattgcgttgtttcgtctgtttaatcgcgatctgttcggc
aatttcaatgagttatatcgcaccattactcgcacaccgggtccggtggtcctgcatttt
catgtgctgcacagctactggttgaatcttaacagcgtggtgcgcttttgcgaaaaagtg
aaaaaccataaaccggatgtcaccctggtctggacgctgcacgaccactggagtgtaacc
ggacgctgcgcctttaccgacggttgcgaaggctggaaaacgggctgccagaaatgcccg
accttaaataactatccgccggtgaagattgatcgcgcgcaccagctggtggcgggcaaa
cgccagttattccgcgagatgctggcgctgggctgtcagtttatttcccccagccagcat
gtggctgacgctttcaatagtctgtacgggccagggcgttgccggattatcaataatggc
attgatatggcaaccgaagcgattctggcagatctgcctccggtgcgcgaaactcagggc
aagccgaaaatcgcagtggtggcgcatgacctgcgttacgacggcaaaactaaccagcaa
ctggtgcgtgagatgatggcgctgggcgacaaaatcgaactgcatacctttggtaagttc
tcgccgttcaccgctggcaacgtggttaatcacggctttgaaactgacaagcgcaagttg
atgagcgcgctcaatcagatggatgcgctggtgttcagttctcgtgtcgataactacccg
ctgattttgtgtgaggcgctatcgattggcgtgccggtgattgccacccatagcgatgcg
gcgcgggaagtgctgcaaaaatccggtggtaaaaccgtcagtgaagaagaggtgctgcaa
ctggtacagttaagcaaaccggaaatcgcgcaggcgatatttggtaccacgctggctgag
ttcagccaacgcagtcgcgccgcctacagtggacaacagatgctggaggagtatgtcaac
ttctatcagaatctgtag
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