Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3110
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Entry
SFyv_3110 CDS
T03315
Name
(GenBank) deoR-like helix-turn-helix domain protein
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfs03000
]
SFyv_3110
Transcription factors [BR:
sfs03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SFyv_3110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
CoA_trans
GntR
Motif
Other DBs
NCBI-ProteinID:
AIL41275
LinkDB
All DBs
Position
complement(2203064..2203780)
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AA seq
238 aa
AA seq
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MLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQL
ASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENK
DITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGA
MVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIVTDDAVSEVDKLALQKTRVKLITV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgccgat
ttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaaata
atgtccggtaatagtgaaaccgagacccaggaagtcgggtttaaagagcgatttcagctc
gccagcgcgccaaaaaacagaatagcgcaggcggcagtcaaaatgatccatgaagggatg
accgttattctcgacagcggaagtaccacaatgcttatcgccgaaggattaatgaccgct
aaaaatatcacggtgattaccaacagtctcccggcagcgtttgccctttccgaaaataaa
gacattactctggtcgtctgtggtggcacggtccgccataaaacgcgctcgatgcatggt
tccattgccgagcgttcattgcaggatattaatgccgatttaatgtttgtcggtgctgat
ggtattgatgcggttaatggtattacgacctttaatgaaggttattcgattagcggggcg
atggtcaccgccgcaaataaagtgattgccgttctcgattcatcgaaatttaatcgtcgc
ggttttaatcaggtactgccaatcgaaaaaattgacattattgttaccgatgatgctgtg
tcagaggtggataaattggcattgcagaagacacgggtaaaattaattacggtgtag
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