Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3139
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Entry
SFyv_3139 CDS
T03315
Name
(GenBank) YehB
KO
K07347
outer membrane usher protein
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFyv_3139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfs02000
]
SFyv_3139
02044 Secretion system [BR:
sfs02044
]
SFyv_3139
02035 Bacterial motility proteins [BR:
sfs02035
]
SFyv_3139
Transporters [BR:
sfs02000
]
Other transporters
Pores ion channels [TC:
1
]
SFyv_3139
Secretion system [BR:
sfs02044
]
Chaperone-usher system
Type 1 pilus assembly protein
SFyv_3139
Bacterial motility proteins [BR:
sfs02035
]
Pilus system
Fimbrial proteins
SFyv_3139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
Motif
Other DBs
NCBI-ProteinID:
AIL41300
LinkDB
All DBs
Position
complement(2222111..2223628)
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AA seq
505 aa
AA seq
DB search
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI
YVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYSWDI
GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYVSQYYSDYKASGNNKSTYVRF
NSGLNLLEWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQFLGTLRVGDMYTSSDIFDSV
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ
LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGASKQSDFVQAGYQYG
FNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQSYQIAYN
KFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDIYDIADYYQNDFGRKNS
FSANMSQSLPEGWGSVSLSTLWRDY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatgaccccacttgcatcagcaatcgtagcgttattgctcggcattgaagct
tatgcagctgaagaaacctttgatacccattttatgataggtggaatgaaagaccagcag
gttgcaaatattcgtcttgatgataatcaacccttaccggggcagtatgacatcgatatt
tatgtcaataagcaatggcgcgggaaatatgagattattgttaaagacaacccgcaagaa
acatgtttatcaagagaagttatcaagcggttaggcattaatagcgataacttcgccagc
ggtaagcaatgtttaacatttgagcaacttgttcagggtgggagctatagctgggatatc
ggggtttttcgtctcgatttcagtgtcccgcaggcttgggtggaagaactggaaagtggc
tatgttccaccggaaaactgggagcggggtattaatgcgttttatacttcttattatgtg
agtcagtattacagcgactataaagcgtcgggtaacaacaagagtacatatgtacgtttt
aacagcgggttaaatttactggagtggcaactgcattctgatgccagtttcagtaaaaca
aataacaatccaggggtgtggaaaagcaataccctgtatctggaacgtggatttgcccaa
tttctcggcacgcttcgcgtgggtgatatgtacacatcaagcgatatttttgattctgtt
cgcttcagcggtgtgcggttgtttcgtgatatgcagatgttgcctaactcgaaacaaaat
tttacgccacgggtgcaggggattgctcagagtaacgcgctggtaactattgaacagaat
ggttttgtggtttatcagaaagaggttcctcctggcccgtttgcgattacagatttgcag
ttggccggtggtggagcagatcttgatgttagcgtgaaagaggcggacggctcggtaacc
acctatctggtgccttatgcagcggtgccaaatatgctgcaacccggcgtgtcgaaatat
gattttgcggcgggggcgagcaagcaaagtgattttgtccaggcaggttatcagtatggt
tttaataacttattgacgctgtatggcggcacgatggttgctaataattactatgcgttt
accctcggaacgggttggaacacgcgcattggcgcaatttccgtcgatgccacgaagtcg
catagtaaacaagacaacggcgatgtgtttgacgggcaaagttatcaaattgcctacaac
aaatttgtgagccaaacgtcgacgcgttttggtctggcggcctggcgttattcgtcgcgt
gattaccggacatttaacgatcacgtttgggcaaacaataaagataattatcgccgtgat
gaaaacgatatctatgacattgccgattattaccagaacgattttggccgtaaaaatagc
ttttctgccaatatgagccagtcattgccagaaggctggggttctgtgtccttaagtacg
ttatggcgagattactga
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