Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3288
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Entry
SFyv_3288 CDS
T03315
Name
(GenBank) putative endopeptidase Spr
KO
K13694
murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.-
3.4.17.13
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfs01002
]
SFyv_3288
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfs01011
]
SFyv_3288
Enzymes [BR:
sfs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.13 muramoyltetrapeptide carboxypeptidase
SFyv_3288
Peptidases and inhibitors [BR:
sfs01002
]
Cysteine peptidases
Family C40
SFyv_3288
Peptidoglycan biosynthesis and degradation proteins [BR:
sfs01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
SFyv_3288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
DUF6950
LRAT
DHQS
CHAP
DUF3485
Motif
Other DBs
NCBI-ProteinID:
AIL41410
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All DBs
Position
2320380..2320946
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AA seq
188 aa
AA seq
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MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVGSETSSLQASQDEFENL
VRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEM
GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNE
ARRVLSRS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatctcaaccgattttgagatatatcttgcgcgggattcccgcgattgcagta
gcggttctgctttctgcatgtagtgcaaataacaccgcaaagaatatgcatcctgagaca
cgtgcagtgggtagtgaaacatcatcactgcaagcttctcaggatgaatttgaaaacctg
gttcgtaatgtcgacgtaaaatcgcgaattatggatcagtatgctgactggaaaggcgta
cgttatcgtctgggcggcagcactaaaaaaggtatcgattgttctggtttcgtacagcgt
acattccgtgagcaatttggcttagaacttccgcgttcgacttacgaacagcaggaaatg
ggtaaatctgtttcccgcagtaatttgcgtacgggtgatttagttctgttccgtgccggt
tcaacgggacgccatgtcggtatttatatcggcaacaatcagtttgtccatgcttccacc
agcagtggtgttattatttccagcatgaatgaaccgtactggaagaagcgttacaacgaa
gcacgccgggttctcagccgcagctaa
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