Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3903
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Entry
SFyv_3903 CDS
T03315
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfs03000
]
SFyv_3903
Transcription factors [BR:
sfs03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SFyv_3903
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_41
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
AIL41892
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Position
2793905..2794567
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AA seq
220 aa
AA seq
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MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLQEALSQLVAERLVTVVN
QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS
EKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKH
DQHQTLTAAVLPRDTARASELMRQHLLTPIPIIQQAMAGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccattacgtctctggatggctatcgctggctgaagaacgatattattcgcggtaat
tttcaaccggatgaaaaattacggatgagtttactgacatcgcgttatgcacttggcgtt
gggccgttgcaggaagcactttctcaactggtggcggaacggctggtcacggtggtgaat
caaaaagggtatcgggtggcgtctatgtcagagcaggagctgctcgatattttcgacgcc
cgcgccaatatggaagcgatgctggtcagtctggcgattgcccgcggtggcgatgaatgg
gaggcagacgttctcgcaaaagcgcatctgctcagtaagctggaagcctgtgacgccagc
gagaaaatgcttgatgagtgggatctgcgtcatcaggcgtttcatacagcaattgtggcg
ggctgtggttctcactatttgctgcaaatgcgtgaacggttgtttgatctggcggcgcgt
tatcgatttatctggctgcggcgaacggtgctttcggtggaaatgctggaggataaacac
gatcagcaccagaccctgactgcggcggtactgccgcgagatacagcgcgcgccagtgag
ttaatgcgccagcatttactgacgccaattcccattatccagcaggcgatggctggcaat
taa
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