Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3985
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Entry
SFyv_3985 CDS
T03315
Name
(GenBank) FhlA
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfs03000
]
SFyv_3985
Transcription factors [BR:
sfs03000
]
Prokaryotic type
Helix-turn-helix
Other families
SFyv_3985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_16
HTH_50
HTH_8
ABC_tran
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AIL41954
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Position
2848322..2850436
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AA seq
704 aa
AA seq
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MHRFAVLSWKNKMSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAA
IVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQL
AAGGLYPKFGHYCLMPLAAGGHIFGGCEFIRYDERPWSEKEFNRLQTFTQIVSVVTEQIQ
SRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLR
SHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINLYERDDLAPYERM
LFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNAL
AYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLIL
GETGSGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGANAQRIGR
FELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKM
VADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRT
LSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDIALPEPETPPAATVVAQEGEDEYQL
IVRVLKETNSVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKSALI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgcaccgctttgcggtgctttcctggaagaacaaaatgtcatatacaccgatgagtgat
ctcggacagcaagggttgttcgacatcactcggacactattgcagcagcccgatctggcc
tcgctgtgtgaggctctttcgcaactggtaaagcgttctgcgctcgccgacaacgcggct
attgtgttgtggcaagcgcagactcaacgtgcgtcttattacgcgtcgcgtgaaaaagac
acccccattaaatatgaagacgaaactgttctggcacacggtccggtacgcagcattttg
tcgcgccctgatacgctgcattgcagttacgaagaattttgtgaaacctggccgcagctg
gccgcaggtgggctataccccaaatttggtcactattgcctgatgccactggcggcggga
gggcatatttttggtggctgtgaatttattcgttatgacgagcgtccctggagcgaaaaa
gagttcaatcgtctgcaaacatttacgcagatcgtttctgtcgtcaccgaacaaatccag
agccgcgtcgtcaacaatgtcgactatgagttgttatgccgggagcgcgataacttccgc
atcctggttgccattaccaacgcggtgctttcccgcctggatatggacgaactggtcagc
gaagtcgccaaagaaatccattactatttcgacattgacgatatcagcattgtcttacgc
agccaccgtaaaaacaaactcaacatctactccactcactatcttgataaacaacatccc
gcccacgaacagagcgaagtcgatgaagccggaaccctcaccgaacgcgtgttcaaaagt
aaagagatgctgctgatcaatctctacgagcgggacgatttagccccctatgaacgcatg
ttgttcgacacctggggcaaccagattcaaaccttgtgcctgttaccgctgatgtctggc
gacaccatgctgggcgtgctgaaactggcgcaatgcgaagagaaagtgtttaccactacc
aatctgaatttgctgcgccagattgccgaacgtgtggcaatcgctgtcgataacgccctc
gcctatcaggaaatccatcgtctgaaagaacggctggttgatgaaaacctcgccctgacc
gagcagctcaacaatgttgatagtgaatttggcgagattattggccgcagcgaagccatg
tacagcgtgcttaaacaagttgaaatggtggcgcaaagtgacagtaccgtgctgatcctc
ggtgaaactggctcgggtaaagagctgattgcccgtgcgatccataatctcagtgggcgt
aataatcgccgcatggtcaaaatgaactgcgcggcgatgcctgccggattgctggaaagc
gatctgtttggtcatgagcgtggggcttttaccggtgccaacgcccagcgcattggtcgt
tttgaactggcggataaaagctctctgttcctcgacgaagtgggcgatatgccactggag
ttacagccgaagttgctgcgtgtattgcaggaacaggagtttgaacgtctcggcagcaac
aaaatcattcagacggacgtacgtttaattgccgcgactaaccgcgatctgaaaaaaatg
gtcgccgaccgagagttccgtagcgatctctattaccgcctgaacgtattcccgattcac
ctgccgccactacgcgagcgtccggaagatattccgctgctggcgaaagcctttaccttc
aaaattgcccgtcgtctggggcgcaatatcgacagcattcctgccgagacgctgcgcacc
ttgagcaacatggagtggccgggtaacgtacgcgaactggaaaacgtcattgagcgcgca
gtattgctaacacgcggcaacgtgctgcagctgtcattgccagatattgctttaccggag
cctgaaacgccgcctgccgcaacggttgtcgcccaggagggcgaagatgaatatcagttg
attgtgcgcgtgctgaaagaaaccaacagcgtggttgccgggcctaaaggcgctgcgcaa
cgtctggggctgaaacgcacgaccctgctgtcacggatgaagcggctgggaattgataaa
tcggcattgatttaa
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