Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3993
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Entry
SFyv_3993 CDS
T03315
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SFyv_3993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfs03400
]
SFyv_3993
DNA repair and recombination proteins [BR:
sfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SFyv_3993
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AIL41958
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Position
2851926..2854451
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AA seq
841 aa
AA seq
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MMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIP
YHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNL
LAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRSNPAELLYAEDFAEMSLIEG
RRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTL
PHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLH
MPVRDTRVLLERQQTIGALQDFTAELQPVLRQVGDLERILARLALRTARPRDLARMRHAF
QQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEE
LDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRR
QTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAEL
DVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLII
TGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMV
EMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFEL
TQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQK
LRELESISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSL
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagtatctcaagctgaaagcccagcatcccgagatcctgctgttttaccgg
atgggtgatttttatgaactgttttatgacgacgcaaaacgcgcgtcgcaactgctggat
atttcactgaccaaacgcggtgcttcggcgggagagccgatcccgatggcggggattccc
taccatgcggtggaaaactatctcgccaaactggtgaatcagggagagtccgttgccatc
tgcgaacaaattggcgatccggcgaccagcaaaggtccggttgagcgcaaagttgtgcgt
atcgttacgccaggcaccatcagcgatgaagccctgttacaggagcgtcaggacaacctg
ctggcggctatctggcaggacagcaaaggtttcggctacgcgacgctggatatcagctcc
gggcgttttcgcctgagcgaaccggccgaccgcgaaacgatggcggcagagctgcaacgc
tctaatccggcggaactgctgtatgcagaagatttcgccgagatgtcgctgattgaaggc
cgtcgcggcctgcgccgtcgcccgctgtgggagtttgaaatcgacaccgcgcgccagcag
ttgaatctgcaatttggcacccgcgatctggtcggttttggcgtcgagaacgcgccgcgc
ggactttgtgctgccggttgtctgttgcagtatgcgaaagatacccaacgcacgaccctg
ccgcatattcgttctatcaccatggaacgtgagcaggacagcatcattatggatgccgcg
acacgtcgtaacctggaaattactcagaacctggcgggcggtgcggaaaatacgctggct
tctgtgctcgactgcaccgtcacgccgatgggtagtcgtatgctgaaacgctggctgcat
atgccagtgcgcgatacccgcgtgttgcttgagcgccagcaaactattggcgcattgcag
gatttcaccgccgagttgcagccggtactgcgtcaggtcggcgacctggaacgtattctg
gcacgtctggctttacgaactgctcgcccacgcgatctggcccgtatgcgccacgctttc
cagcaactgccggagctgcgtgcgcagttagaaactgtcgatagtgcaccggtacaggcg
ctacgtgagaagatgggcgagtttgccgagctgcgcgatctgctggagcgagcaatcatc
gacacaccgccggtgctggtacgcgacggtggtgttatcgcatcgggctataacgaagag
ctggatgagtggcgcgcgctggctgacggcgcgaccgattatctggagcgtctggaagtc
cgcgagcgtgaacgtaccggcctggacacgctaaaagttggctttaatgcggtgcacggc
tactacattcaaatcagccgtgggcaaagccatctggcacccatcaactacatgcgtcgc
cagacgctgaaaaacgccgagcgctacatcattccagagctaaaagagtacgaagataaa
gttctcacctcaaaaggcaaagcactggcactggaaaaacagctttatgaagagctgttc
gacctgctgttgccgcatctggaagcgttgcaacagagcgcgagcgcgctggcggaactc
gacgtgctggttaacctggcggaacgggcctataccctgaactacacctgcccgaccttc
attgataaaccgggcattcgcattaccgaaggtcgccatccggtagttgaacaagtactg
aatgagccatttatcgctaacccgctgaatctgtcgccgcagcgccgtatgttgattatt
accggcccgaacatgggcggtaaaagtacctatatgcgccagaccgcactgattgcgctg
atggcctacatcggcagctatgtaccggcacaaaaagtcgagattggacctatcgatcgc
atctttacccgcgtaggcgcggcagatgacctggcttccgggcgctcaacctttatggtg
gagatgactgaaaccgccaatattttacataacgccaccgaatacagtctggtgttaatg
gatgagatcgggcgtggaacgtccacctacgatggtctgtcgctggcgtgggcgtgcgca
gaaaatctggcgaataagattaaggcattgacgctgtttgccacccactatttcgagctg
acccagctaccggagaaaatggaaggcgtcgccaacgtacatctcgatgcgctggagcac
ggcgacactatcgcctttatgcacagcgtgcaggacggcgcggcgagcaaaagctacggt
ctggcggttgctgctctggcgggcgtaccgaaagaggttattaagcgcgcacggcaaaaa
ctgcgtgagctggaaagcatttcgccgaacgccgccgcgacgcaagtggatggtacgcag
atgtctttgctgtcagtgccagaagaaacttcgcctgcggtcgaagcactggaaaatctc
gacccggattcactgactccgcgtcaggcgctggagtggatttatcgcttgaagagtctg
gtgtaa
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