Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3997
Help
Entry
SFyv_3997 CDS
T03315
Name
(GenBank) putative HTH-type transcriptional regulator ygbI
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_24
HTH_20
E3_UFM1_ligase
MarR
Rrf2
Fe_dep_repress
MarR_2
HTH_27
Put_DNA-bind_N
HTH_23
HTH_38
HTH_5
Ribosomal_S25
Motif
Other DBs
NCBI-ProteinID:
AIL41961
LinkDB
All DBs
Position
complement(2855260..2856027)
Genome browser
AA seq
255 aa
AA seq
DB search
MIPVERRQIILEMVAEKGIVSIAELTDRINVSHMTIRRDLQKLEQQGAVVLVSGGVQSPG
RVAHEPSHQVKTALAMTQKAAIGKLAASLVLPGSCIYLDAGTTTLAIAQHLIHMESLTVV
TNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLCSLMIDQAFISASSWSVRG
ISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASR
ALAKQDLSLLVAKNE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
ttgatacccgtagagcgtcgccaaatcatccttgagatggtagctgaaaaaggcattgtc
agtattgctgaactaacggacagaattaatgtgtcacatatgaccattcgtcgggattta
caaaaactggagcagcagggagccgttgtgctggtgtccggaggcgtccagtctccggga
cgcgtggcgcatgaaccttctcatcaggtaaaaactgcgctggcaatgacgcaaaaagcg
gctattggcaagctggcggcaagtcttgttctgccgggaagttgtatctatctggatgcg
ggaacgaccacgttagcgatagcacagcatctgattcacatggagtcactgactgtggtc
acaaacgatttcgttattgcgaactacttgctcgacaacagtaattgcacaattattcac
actggcggtgcagtgtgtcgggaaaaccgttcctgtgtcggggaagccgctgcgaccatg
ctgtgcagcctgatgattgatcaggcttttatttctgcatcgtcatggagtgtgcggggg
atttctacgccagcggaagataaagtcacggtgaaacgggcgattgccagtgccagccgc
cagcgagttttggtctgtgatgcgacgaaatatggtcaggtggcgacatggctggcgtta
ccattaagcgagtttgatcagattattacagacgacggtttgccggagagtgccagtcgc
gcgctggcgaagcaggatctctctttgctggtagcgaaaaatgaataa
DBGET
integrated database retrieval system
