KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4027
Entry
SFyv_4027         CDS       T03315                                 
Name
(GenBank) putative helicase
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfs02048]
    SFyv_4027
Enzymes [BR:sfs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SFyv_4027
Prokaryotic defense system [BR:sfs02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    SFyv_4027
SSDB
Motif
Pfam: Cas3_HD DEAD ResIII
Other DBs
NCBI-ProteinID: AIL41985
LinkDB
Position
complement(2875512..2876663)
AA seq 383 aa
MRKYPLSLLKDKNIVTFFDFWGKNRRGEKEGIDDYHLLCWHLLDVAAMGYLMVKRNCFGL
ADYFRQLGISDKEQAARFFAWLLCWHDIGKFARSFQQLYLPPEFKIQEGARKNYEKISHS
TLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPED
KAAARDFLLEIKPLFPRIEIPTFWDDDEGVELIKQLSWYISATVVLADWTGSSTRFFPRV
AQAMDIEDYWQKALVQAQNALTVFPPQAETAPFTGINTLFPFIENTTPLQQKVLDLDINQ
PGPQLFILEDVTGAGKTEAALILAHRLMAAGNAQGLFFGLPTMATANAMYDRLVKTWLAF
YSPEVFPAPAEINRRNTVRFSRK
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgcgtaaatatcctttaagtttactgaaggataaaaatattgtgactttctttgatttc
tggggaaaaaaccgacgtggcgagaaagagggtatcgacgactatcaccttctttgctgg
catttgctggatgtggccgcaatgggctatttaatggttaaaagaaattgcttcgggctg
gctgattattttcgtcaattagggatttctgacaaggaacaggcagctcgatttttcgcc
tggttgctgtgctggcacgatattggaaaatttgcccgctcttttcaacaactttacctg
ccccctgaattcaagattcaggaaggtgccagaaaaaattacgaaaaaatctctcattca
acgctgggctactggttgtggaatcattatttaagtgaatgtcaggagttacttccttca
tcttcgctctctccgcgcaaacttaggcgagtgatagaaatgtggatgcccgtgacgaca
gggcatcatggtcggccccctgatcgtatggatgaattggataattttctgcctgaagac
aaagctgcagcacgagattttctccttgaaatcaagccactgtttccgcgaatagagatc
cccacattctgggatgatgacgagggcgttgaacttataaaacaactttcctggtatatc
tctgcaaccgtcgtacttgcagactggacagggtcgtcaacgcgattttttccacgcgtc
gcacaggcaatggatattgaagattactggcaaaaggctttagttcaggctcaaaacgca
ttaaccgtctttccgccacaagcagaaaccgcgcctttcaccggaattaatacgctgttt
ccttttattgagaatacgacaccgttacagcaaaaggtgctggatctggatatcaatcag
ccaggaccacagttgtttattctggaagatgtgaccggcgcaggtaaaacagaagcggcg
cttatcctggcgcacaggttgatggctgcgggtaacgctcaggggctgttttttggcctg
ccaacaatggcaacggccaatgccatgtacgatcgactggtcaaaacctggcttgctttc
tattcgccagaggtgttccccgctccagcggagataaaccggcgcaatacggtgcggttt
tcccggaagtaa

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