Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4512
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Entry
SFyv_4512 CDS
T03315
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SFyv_4512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfs03400
]
SFyv_4512
Enzymes [BR:
sfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
SFyv_4512
DNA repair and recombination proteins [BR:
sfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SFyv_4512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIL42346
LinkDB
All DBs
Position
complement(3229799..3230152)
Genome browser
AA seq
117 aa
AA seq
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MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLL
DYRCGITKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFS
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggatattttggctccagggttacgggtcgtgttttgcggtatcaaccctggg
ctttcatccgccgggactggttttccctttgctcatccggcaaatcgcttctggaaggtg
atatatcaggccgggtttaccgaccgtcagttgaagccgcaggaggcacagcatctgctg
gattatcgttgtggcatcaccaaactggtagaccgtccaacggtgcaagccaatgaagtt
tcaaagcaggagctgcacgcaggtgggcgtaagctgattgaaaaaattgaagattatcag
ccgcaggcgttggctattctgggcaaacaagcatatgaacagggattcagctag
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