Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4521
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Entry
SFyv_4521 CDS
T03315
Name
(GenBank) Putrescine aminotransferase
KO
K09251
putrescine aminotransferase [EC:
2.6.1.82
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00310
Lysine degradation
sfs00330
Arginine and proline metabolism
sfs01100
Metabolic pathways
sfs01120
Microbial metabolism in diverse environments
Module
sfs_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SFyv_4521
00330 Arginine and proline metabolism
SFyv_4521
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfs01007
]
SFyv_4521
Enzymes [BR:
sfs01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.82 putrescine---2-oxoglutarate transaminase
SFyv_4521
Amino acid related enzymes [BR:
sfs01007
]
Aminotransferase (transaminase)
Class III
SFyv_4521
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Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_3
YdiH
SH3_12
Motif
Other DBs
NCBI-ProteinID:
AIL42353
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Position
3234143..3235522
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AA seq
459 aa
AA seq
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MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAG
GDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQE
LLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGVF
HGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPI
QGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAK
ALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAE
QKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLN
NAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaggttaccttcgagcgcatcggctttagcgtgcagcgcccacgccctgaatctc
attgagaagcgaacgctggatcatgaggagatgaaagcacttaaccgagaggtgattgaa
tacttcaaagagcatgtcaatccggggtttttagagtatcgcaaatctgttaccgccggc
ggggattacggagccgtagagtggcaagcgggaggtttaaatacgcttgtcgacacccag
ggacaggagtttatcgactgcctgggaggttttggaattttcaacgtggggcaccgtaat
ccagttgtggtttccgccgtacagaatcaacttgcgaaacaaccactgcacagccaggag
ctactcgatccgttacgggctatgctggcgaaaacccttgctgcgctaacgcccggtaaa
ctgaaatacagcttcttctgtaatagcggcaccgagtccgttgaagcggcgctgaagctg
gcgaaggcttatcagtcgccgcgcggcaaatttacttttattgccaccagcggcgtgttc
cacggtaaatcacttggcgcgctgtcggccacggcgaaatcgaccttccgcaaaccgttt
atgccactgctgccagggttccgtcatgtgccgtttggcaatatcgaagccatgcgcacg
gctcttaatgagtgcaaaaaaaccggtgatgatgtggctgcggtgatcctcgaaccgatt
cagggcgaaggtggcgtaattctgccgccgccgggctatctcaccgccgtgcgtaagctg
tgcgatgagttcggcgcactgatgatcctcgatgaagtacaaacgggcatggggcgcacg
ggcaagatgtttgcctgtgaacatgagaacgttcagccggacattctgtgtctggcaaaa
gccctcggcggcggcgtgatgccgattggcgcgaccatcgccactgaagaggtgttttca
gttctgttcgacaacccattcctgcataccaccacctttggcggcaacccgctggcctgt
gcggcggcgctggcgaccatcaatgtgttgctggagcagaacttaccggctcaggctgag
caaaaaggcgatatgttgctggacggtttccgtcaactggcgcgggaatatcccgatctg
gtacaggaagcgcgtggtaaagggatgttgatggcgattgagtttgttgataacgaaatc
ggctataactttgccagcgagatgttccgccagcgcgtactggtggccggaacgctcaat
aacgccaaaacgatccgcattgaaccgccactgacactgaccattgaacagtgtgaactg
gtgatcaaagcggcgcgtaaggcgctggcggccatgcgagtaagtgtcgaagaagcgtaa
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