Shigella flexneri Shi06HN006 (serotype Yv): SFyv_5139
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Entry
SFyv_5139 CDS
T03315
Name
(GenBank) putative diguanylate cyclase
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SFyv_5139
Enzymes [BR:
sfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SFyv_5139
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
CASP_dom
UL41A
Motif
Other DBs
NCBI-ProteinID:
AIL42820
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All DBs
Position
complement(3676653..3678641)
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AA seq
662 aa
AA seq
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MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA
ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI
SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR
LILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE
NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV
EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC
SIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL
ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL
EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPED
SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE
EK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagtcgctcgttaacaatcaagcagatggcaatggtggcagccgttgtcctg
gtgttcgtttttattttttgcaccgttttgctgttccatctggtccagcagaatcgctat
aacacggctacgcaactggaaagcattgctcgctctgtccgcgaacccttatcttcagct
attttgaaaggcgatattcccgaagcggaagctattcttgccagcattaaaccggcaggc
gtggtcagccgtgccgatgtagtgctgcctaaccagttccaggcgctgcgtaaaagtttt
attccagagcgtccggtgccggtaatggttactcgcctgtttgagctaccggttcaaatc
tcgctgggcgtctactcgctcgaacgtccggcaaatccgcagccaatagcctatctggtg
ctacaggcggattccttccgtatgtataagttcgtgatgagcactctctcaacgttagtg
accatttacttacttttgtcgcttatcctgaccgtcgccatcagctggtgcattaaccgc
ctgattttgcatccgttacgcaatattgctcgcgaacttaacgccatcccagcccaggag
cttgttggtcaccaactggcattaccgcgtctgcatcaggacgatgaaatcggtatgttg
gtgcgcagttacaacctcaaccagcaattgctgcagcgccattatgaagaacagaacgaa
aatgcgatgcgcttcccggtgtcggatttgccgaacaaagccttgctgatggagatgctg
gagcaggttgtcgcgcgtaaacaaaccaccgcgctgatgatcatcacctgtgaaaccctg
cgtgatactgcgggcgtgctgaaagaggcgcaacgagaaattctgctgctgacgctggtg
gaaaaactcaaatcggtactgtcgccacgtatgatcctcgcgcagattagcggttatgac
tttgctgtcattgccaacggtgtacaggaaccgtggcacgcaatcactttgggtcagcaa
gtactcactatcatgagcgagcgcctgccgattgaacgtattcaactccgtccgcactgt
agcattggcgtggcgatgttctacggcgatctcaccgccgaacagctttacagtcgcgct
atttctgcggcatttaccgctcgccataaaggcaagaatcagattcagttctttgatccg
cagcagatggaagcagcccagaagcggttgacggaagagagcgatatccttaatgcactg
gaaaatcatcagtttgcaatttggttacagccacaggtcgagatgaccagcggtaaactg
gtcagtgcggaagtgttactgcgtatccagcaaccggatggcagttgggacctgccggat
ggcttaatcgatcgcattgagtgctgtgggctgatggttaccgtcggtcactgggtgctg
gaagagtcctgtcgattgcttgcagcctggcaagagcgcggcattatgctgcccttgtcg
gtaaacctctctgcgctgcaactgatgcacccgaatatggtggcggatatgctggaactg
ttaacccgctatcgcattcagccgggaacactgattctggaagtgacagaaagccgacgt
attgacgaccctcatgctgcggtggcaatcctccgtccgctgcgcaatgccggagttcgg
gtggcgctggatgatttcggcatgggctacgcagggctgcgtcagctgcagcatatgaaa
tcgttgccaatcgacgtactgaaaatcgacaaaatgtttgttgaaggcttgccggaagat
agcagcatgattgctgcaattatcatgctggcgcagagcctgaacttacaaatgattgcc
gaaggcgtggagactgaagcacaacgagactggctggcaaaagcgggcgttggtattgcc
cagggcttcctttttgctcgcccactccctattgaaatcttcgaagagagttacctggaa
gaaaagtag
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