Shigella flexneri Shi06HN006 (serotype Yv): SFyv_5331
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Entry
SFyv_5331 CDS
T03315
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SFyv_5331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfs03021
]
SFyv_5331
03400 DNA repair and recombination proteins [BR:
sfs03400
]
SFyv_5331
Enzymes [BR:
sfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SFyv_5331
Transcription machinery [BR:
sfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SFyv_5331
DNA repair and recombination proteins [BR:
sfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SFyv_5331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AIL42966
LinkDB
All DBs
Position
3813250..3813525
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQELEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccg
gaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgttcgcgaacgccaggaacagcaagagctggaagccgctgaatta
caagccgttaccgctattgctgaaggtcgtcgttaa
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