Shigella flexneri Shi06HN006 (serotype Yv): SFyv_5961
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Entry
SFyv_5961 CDS
T03315
Name
(GenBank) AdiA
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00330
Arginine and proline metabolism
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
Module
sfs_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SFyv_5961
Enzymes [BR:
sfs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
SFyv_5961
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Pyridoxal_deC
KaiA_N
Aminotran_1_2
Late_protein_L1
Motif
Other DBs
NCBI-ProteinID:
AIL43415
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Position
4281774..4284044
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AA seq
756 aa
AA seq
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MMKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMF
SYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDT
ADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHD
YYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQ
ACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKI
SESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPI
YADHYAMRGEPGDHNGPTVFATHSIHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHA
TTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW
NKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSIL
APGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLC
SFKHHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLP
VAEITPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVS
YLRSLQSWDHHFPRFEHETEGTEIIDGIYHVMCVKA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagtattaattgttgaaagcgagtttctccatcaagacacctgggtcggtaac
gccgttgagcgtctggcagatgctttaagccagcaaaatgttaccgtgattaaatccacc
tcctttgatgatggttttgccattctctcttcaaacgaagccattgactgcctgatgttc
agctatcaaatggagcatccggacgaacatcaaaacgtcagacaattgatcggtaagctt
catgagcgccaacaaaacgtgccggtcttcctgttgggcgatcgggaaaaagccctcgcc
gcaatggaccgggatctgctggagcttgtcgatgaattcgcctggattctggaagatacc
gccgactttatcgccggacgcgccgttgccgcgatgacccgctaccgccagcagctgttg
ccgccactgttcagcgcgctgatgaaatatagtgacatccatgaatattcctgggcagcg
ccaggccaccagggcggcgttggttttaccaaaacacccgccggacgtttctaccatgac
tactatggtgaaaatctgttccgtaccgacatgggcatcgaacgaacttccctcggttct
ttgcttgaccatactggcgcatttggcgaaagcgaaaaatatgccgcacgcgtatttggt
gccgatcgctcctggtcggtagtcgtcggtacttccggctctaaccgcaccatcatgcag
gcttgcatgaccgataacgatgtcgtggtcgttgaccgtaactgccataaatccatcgaa
caaggtttgatgctgacaggcgcgaaaccggtctatatggtgccaagccgcaaccgctac
ggcattatcgggccaatctatccgcaggaaatgcaacctgaaaccttgcaaaagaaaatc
agtgaaagcccgctgaccaaagacaaagccgggcaaaaaccgtcttactgcgtggtaacc
aactgcacctatgacggcgtgtgttataacgctaaagaagcgcaggatctgctggaaaaa
acctccgatcgtctgcactttgacgaagcctggtacggctatgcacgtttcaacccgatc
tatgccgatcactatgccatgcgcggcgaacctggcgatcacaacggtcctaccgttttc
gccacccactccatccacaaactgctgaatgcgctgtcacaggcttcttatattcatgta
cgtgaaggtcgtggggcgattaacttctcccgcttcaaccaggcctacatgatgcatgcc
accacctccccgctgtatgccatctgcgcatccaacgacgtggcggtgtcgatgatggac
ggcaacagcggcctgtcactgacacaggaagtgattgacgaagcggttgatttccgtcag
gcgatggcgcggctatataaagagttcaccgctgacggtagctggttcttcaaaccgtgg
aacaaagaagtcgtcaccgacccacaaaccggcaaaacctatgactttgctgacgcacca
accaaactgctgaccaccgttcaggactgctgggtaatgcatccgggcgaaagctggcac
ggcttcaaagatattccggataactggagtatgctcgacccaattaaagtcagcatcctt
gctccgggaatgggtgaagatggtgaactggaagaaaccggtgttccggcggcgctggtc
actgcctggcttggtcgccacggcattgtgcctacccgcaccactgacttccaaattatg
ttcctgttctctatgggcgtaacccgtgggaaatgggggactctggttaacaccctttgc
tccttcaaacaccactatgacgccaacacaccgctggcgcaggtgatgccggaacttgtt
gaacaatatcctgacacttacgcgaacatggggattcacgatctgggtgacaccatgttt
gcctggctgaaagaaaacaaccctggcgcacggttgaacgaagcctattccggcctgccg
gtggcggaaatcaccccgcgtgaagcgtacaacgcgattgtcgacaacaatgtcgaactg
gtatccattgaaaatctgccaggacgcatcgcggcaaactcagttatcccgtatccgcca
ggaatcccgatgctgctgtctggtgaaaacttcggcgataaaaacagtccgcaagtaagt
tatttacgctcgctgcaatcctgggaccaccatttccctagatttgaacacgaaactgaa
gggactgaaattattgacggtatttaccacgttatgtgcgtgaaagcgtaa
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