Shigella flexneri Shi06HN006 (serotype Yv): SFyv_6001
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Entry
SFyv_6001 CDS
T03315
Name
(GenBank) cytochrome c552
KO
K03385
nitrite reductase (cytochrome c-552) [EC:
1.7.2.2
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00910
Nitrogen metabolism
sfs01100
Metabolic pathways
sfs01120
Microbial metabolism in diverse environments
sfs01310
Nitrogen cycle
Module
sfs_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SFyv_6001
Enzymes [BR:
sfs01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.2 With a cytochrome as acceptor
1.7.2.2 nitrite reductase (cytochrome; ammonia-forming)
SFyv_6001
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GFIT
Motif
Pfam:
Cytochrom_C552
Cytochrome_C7
Paired_CXXCH_1
Mtrc-MtrF_II-IV_dom
Cytochrom_c3_2
Cytochrome_CBB3
zf_Tbcl
Dehyd-heme_bind
Motif
Other DBs
NCBI-ProteinID:
AIL43445
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Position
4312099..4313535
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AA seq
478 aa
AA seq
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MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNETFAPQHHDQYLSWKATS
EQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVRETLRTGAPKNAEDGPLPM
ACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGCADCHNTASPEFAKGKPELTL
SRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYFDGKNKAVKFPWDDGMKVENMEQ
YYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHGKNNVTCIDCHMPKVQNAEGKLYTD
HKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQSINDLKIKVEDQLVHAHFEAKAALDA
GATEAEMKPIQDDIRHAQWRWDLAIASHGIHMHAPEEGLRMLGTAMDKAADARTKLARLL
ATKGITHEIQIPDISTKEKAQQAIGLNMEQIKAEKQDFIKTVIPQWEEQARKNGLLSQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggataaaaataaacgcacgccgtatcttcagcttattgattccttttttcttt
ttcacttctgttcacgctgaacaaacggcagctcccgcaaaacctgtaactgtggaagcg
aagaatgaaacctttgccccgcagcatcacgatcaatatctctcctggaaagccacctcg
gaacagtcagagcgtgttgacgccctggcggaagatccacggctggtgatcctgtgggcg
gggtatcccttctcgcgcgattacaacaagcctcgtggacatgcctttgctgtgaccgat
gtgcgtgaaaccctgcgtaccggtgcgccgaaaaacgctgaagatggtccgctaccgatg
gcgtgctggagttgtaaaagcccggatgtggcgcgtctgatccagaaagacggcgaagat
ggctacttccacggtaaatgggcgcgcggcggcccggaaatcgtcaacaacttaggttgt
gccgactgccataacaccgcctcaccagagttcgccaaaggcaaaccggagttaaccctt
tcccgtccgtatgcggctcgcgcgatggaagccattggtaaaccttttgagaaagccgga
cgtttcgaccagcaatcgatggtttgcggtcagtgccatgtggagtattacttcgacggc
aaaaacaaagcggttaaattcccgtgggatgacggcatgaaagtcgaaaatatggagcag
tattacgacaaaattgccttctctgactggactaactccctgtcgaaaacgccaatgctg
aaagcgcagcacccggaatatgaaacctggacagcgggcattcacggtaaaaacaacgtg
acctgtatcgactgccatatgccaaaagtgcagaacgccgaaggcaaactctacaccgac
cataaaattggtaatccgtttgataacttcgcccagacttgtgcgaactgccatacccag
gataaagctgccttgcaaaaagtggtcgcggaacgtaagcaatcgattaacgacctgaaa
atcaaggttgaagatcaactggttcacgctcacttcgaagcgaaagcggcgctggatgca
ggcgcgacggaagccgaaatgaagccgattcaggacgatatccgtcatgcccagtggcgt
tgggatctggcgattgcttcccacggtattcatatgcacgcaccggaagaaggtctacgg
atgctcggtacggcgatggataaagcggcggatgcgcgcaccaaactggcgcgcctgctg
gcgaccaaaggtatcacccatgaaatccagatcccggatatctcgaccaaagagaaagcc
cagcaggccattggcctgaacatggaacaaatcaaggccgagaagcaggacttcatcaaa
acggtgatcccgcagtgggaagagcaggcacgtaaaaacggtctgttaagccaataa
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