Shigella flexneri Shi06HN006 (serotype Yv): SFyv_6272
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Entry
SFyv_6272 CDS
T03315
Name
(GenBank) YjeR
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SFyv_6272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfs03019
]
SFyv_6272
03009 Ribosome biogenesis [BR:
sfs03009
]
SFyv_6272
Messenger RNA biogenesis [BR:
sfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SFyv_6272
Ribosome biogenesis [BR:
sfs03009
]
Eukaryotic type
Pre-60S particles
RNases
SFyv_6272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIL43652
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All DBs
Position
4509909..4510454
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEVYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaatctgaatattctg
gcagaagggccgaccattgcagtacatcagtccgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtagagcgcgtgaaagcgagcacgatg
ggcgatcgggaagctgaactggcaacgctcgaattcttaaaacagtgggtgcctgcggga
aaatcgccgatttgcggtaacagcatcggacaggaccgtcgtttcctgtttaaatacatg
ccggagctggaagtctacttccactaccgttatctcgatgtcagcaccctgaaagagctg
gcgcgccgctggaagccggaaattctggatggttttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcattttatcaag
ctgtaa
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