KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_6335
Entry
SFyv_6335         CDS       T03315                                 
Name
(GenBank) type III restriction enzyme, res subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfs02048]
    SFyv_6335
Enzymes [BR:sfs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SFyv_6335
Prokaryotic defense system [BR:sfs02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SFyv_6335
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C AAA_11 SNF2-rel_dom AAA_19 HSDR_N_2 DUF87 AAA_34 PhoH
Other DBs
NCBI-ProteinID: AIL43699
LinkDB
Position
complement(4551556..4553769)
AA seq 737 aa
MIEAKANKHEIGKGMQQGIEYARLLDVPFVFATNGDGFIFRDATAAEGECLEKQITLDDF
PSPAELWQKFCLWKGYTQAQLPVITQDYYDDGSGKSPRYYQLQAINKTIEAVSNGQNRVL
LVMATGTGKTYTAFQIIWRLWKSKNKKRILFLADRNILVDQTKNNDFQPFGTAMTKVSGR
TIDPAYEIHLALYQAITGPEEDQKAFKQVAPDFFDLIVIDECHRGSASEDSAWREILDYF
SSATQIGLTATPKETHEVSSTDYFGDPVYVYSLKEGIEDGFLAPYKVVRVDIDVDLQGWR
PTKGQTDLNGEVIDDRIYNQKDFDRTMVIDERTELVARTITDYLKRTNPMDKTIVFCNDI
DHAERMRRALVNLNPQQVKKNDKYVMKITGDDEIGKAQLDNFINPKKPYPVIATTSELMT
TGVDAKTCKLVVLDQNIQSMTKFKQIIGRGTRIDERYGKLWFTILDFKKATELFADERFD
GIPEKVMDTTPEDIADPESDFEEKLEEISEHDDEQVTGVDEPPAPPYQVTDTDDVGPFPE
EDEKKIRKFHVNGVAVGVIAQRVQYYDADGKLVTESFKDYTRKTLLKEYASLDDFTRKWQ
DADRKEAIIHELEQQGIIWEVLAEEVGKDLDPFDMLCHVVYGQPPLTRKERAENVHKRNY
FTKYSEAAQAVLDNLLDKYADAGVQEIESIQVLKLKPFDSMGTLPEIIKTGFGDRNGYNQ
ALSELENEIYQLPPRSA
NT seq 2214 nt   +upstreamnt  +downstreamnt
gtgattgaagcaaaagccaacaaacatgaaattggcaaagggatgcaacagggcattgaa
tatgcgcgcctgctggacgttccttttgtttttgccaccaacggtgatggctttatcttc
cgcgatgccaccgcagccgaaggtgaatgccttgaaaagcaaataacgctggatgacttc
ccctcccccgctgaactctggcaaaaattctgcctctggaaaggatacacacaagctcag
cttccggtgattactcaggactattacgacgatggcagcggcaaatcgcctcgttattat
caacttcaggcaatcaacaaaaccattgaagccgtctccaacgggcaaaaccgcgttctg
ctggtcatggcgaccggaacagggaaaacctataccgcattccagatcatctggcgcctg
tggaaatcaaaaaataaaaaacgcattttgttccttgccgatcgcaacattctggtcgac
caaaccaaaaataatgatttccagccatttggtacggcaatgaccaaagtcagcggacgc
accattgatcccgcttatgaaattcacctcgcgctctatcaggctataactggcccggag
gaagaccaaaaagcgtttaaacaagtcgcaccagatttcttcgatctgatcgtgatcgac
gaatgccatcgcggcagcgcatccgaagacagcgcctggcgagagatccttgattatttc
agttccgccacccaaattggcttaaccgccacgccaaaagagacgcatgaagtctccagc
acggattacttcggcgatccggtttacgtctactcactaaaagaagggatcgaagacggc
ttcctcgctccttataaagttgtccgtgttgatattgatgtcgacctgcaaggctggcgc
ccaaccaaagggcaaactgacttaaacggcgaagtgattgacgatcgtatctataaccag
aaagatttcgatcgcacgatggtgatcgacgaacgcacagaactggttgccagaaccatt
accgactacctcaagcgcaccaatccgatggataaaaccatcgtcttctgtaacgacatc
gatcatgcagaacgtatgcgccgcgccctggttaatctcaacccgcagcaggtgaaaaag
aacgacaaatacgtcatgaaaatcaccggcgatgatgaaattggcaaagctcagttggat
aacttcatcaacccgaaaaaaccgtacccggttatcgcgaccacttcagagctgatgacc
actggtgtggatgctaaaacctgcaaactggtagtactagaccagaacatccagtcgatg
accaaattcaagcaaattatcggtcgtggtacacgcatcgacgaacgttacggcaaactc
tggtttaccatcctcgactttaaaaaagccaccgaactgtttgccgatgagcgtttcgat
ggcattcccgaaaaagtcatggataccacaccagaggatatcgccgatccagaatctgat
tttgaagagaaactcgaagaaatcagcgaacatgacgacgaacaggtaacaggcgttgat
gaaccgcctgcgccaccataccaggttaccgataccgatgatgtcggcccatttccggaa
gaagacgagaagaaaatccgcaagtttcacgtcaacggtgtagcggtgggcgttattgca
cagcgcgttcagtattacgacgccgacggtaaactggttaccgaatcctttaaagattac
acccgcaaaacactgctcaaagaatatgcctcgctggatgactttacccgcaagtggcag
gacgccgatcgcaaagaagcgatcattcacgagctggagcaacaggggatcatctgggaa
gtactggcagaagaagtcggtaaagatctcgacccgttcgacatgctttgccacgtagtg
tatggtcagccgccgttaacccgcaaagagcgcgccgagaacgtgcacaagcggaactac
ttcacaaaatactctgaagcagcgcaagccgtgctcgataatctgctggataaatacgcc
gatgcgggcgtacaggagatcgaaagtattcaggtgctgaaacttaaaccattcgacagc
atgggcaccttaccggagattattaaaaccggatttggcgaccgtaacgggtataatcag
gcgctcagcgagctggaaaacgaaatctaccaattaccgccccgctctgcttaa

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