Shigella flexneri Shi06HN006 (serotype Yv): SFyv_6418
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Entry
SFyv_6418 CDS
T03315
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfs03400
]
SFyv_6418
DNA repair and recombination proteins [BR:
sfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SFyv_6418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
Rad51
GvpD_P-loop
AAA_22
SLFN-g3_helicase
AAA_14
ABC_tran
AAA_16
nSTAND3
AAA_24
AAA
DUF7125
NTPase_1
cobW
Zeta_toxin
Zn_ribbon_Thio2
AAA_29
DZR
Viral_helicase1
AAA_5
AAA_30
Herpes_Helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AIL43761
LinkDB
All DBs
Position
4605218..4606600
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AA seq
460 aa
AA seq
DB search
MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSIMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagctccaaaacgcgcctttgtttgtaatgaatgcggggccgattatccgcgc
tggcaggggcagtgcagtgcctgtcatgcctggaacaccatcaccgaggtgcgtcttgct
gcgtcgccaacggtggcgcgtaacgagcgtctcagcggctatgccggtagcgccggggtg
gcaaaagtccagaaactctccgatatcagccttgaagagctgccgcgtttttccaccgga
tttaaagagttcgaccgcgtactaggaggcggcgtggtgccaggaagtgccattctgatt
ggcggtaaccctggtgcggggaaatccacgctgttgctgcaaacgctgtgcaaactggcc
cagcagatgaaaacgctgtatgtcaccggcgaagagtcgctgcaacaggtggcaatgcgc
gctcatcgccttggcctgccgactgacaatctcaatatgttgtcggaaaccagcatcgag
cagatctgcctgattgccgaagaagagcaaccgaagctgatggtaattgactcgatccag
gtgatgcatatggcggatgtacaatcatcgcctggtagcgtggcgcaggtgcgtgaaacg
gcggcttatctgacgcgtttcgccaaaacgcgcggtgtggcgattgtcatggttggacac
gtaaccaaagatggttcgctggctggcccgaaagtgctggaacactgtatcgactgttcg
gtgcttctggatggcgatgccgactcccgttttcgcaccttacgcagccataaaaaccgc
ttcggcgcggtgaatgagctgggcgtcttcgcgatgaccgaacaggggctgcgtgaagtc
agcaacccttcggcaattttcttaagtcgcggagatgaagtgacctccggcagctccgtg
atggtggtgtgggaaggaacgcgtccgttgctggtggagattcaggcgctggtcgatcac
tcgataatggcgaatccgcgccgcgtggcagtggggctggaacaaaaccgtctggcaatc
ctgctggctgtcttgcaccgtcacggtggtctgcaaatggccgatcaggatgtgtttgtg
aacgtggtcggcggcgtgaaggtaaccgaaaccagcgccgacttagcgttactgctggcg
atggtttccagcctgcgtgacagaccgctgccacaggatctggtggtgtttggtgaagtc
gggctggcaggggagatccgcccggtgcccagtggccaggagcggatttctgaagcggcg
aaacacggttttcgccgggcgattgttccggcggctaacgtaccgaaaaaagcgccggaa
gggatgcagatttttggcgttaaaaaactctccgacgcgcttagcgtgttcgacgactta
taa
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