Shigella flexneri NCTC1 (serotype 2a): NCTC1_00138
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Entry
NCTC1_00138 CDS
T03751
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I,Poly(A) polymerase precursor,poly(A) polymerase I,poly(A) polymerase,Polymerase A arginine-rich C-terminus
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC1_00138 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sft03019
]
NCTC1_00138 (pcnB)
Enzymes [BR:
sft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NCTC1_00138 (pcnB)
Messenger RNA biogenesis [BR:
sft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC1_00138 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CDX05431
UniProt:
A0A658YVJ2
LinkDB
All DBs
Position
1:complement(148999..150363)
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AA seq
454 aa
AA seq
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MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV
SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV
IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMR
VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP
PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgctaagccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtg
atcccgcgtgagcagcatgctatttcccgcaaagatatcagtgaaaatgccctgaaggta
atgtacaggctcaacaaagcgggatacgaagcctggctggttggcggcggcgtgcgcgac
ctgttacttggcaaaaagccgaaagattttgacgtaaccactaacgccacgcctgagcag
gtgcgcaaactgttccgtaactgccgcctggtgggtcgccgtttccgtctggctcatgta
atgtttggcccggagattatcgaagttgcgaccttccgtggacaccacgaaggtaacgtc
agcgaccgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttc
ggctccatcgaagaagacgcccagcgccgcgatttcactatcaacagcctgtattacagc
gtagcggattttaccgtccgtgattacgttggtggtatgaaggatctgaaggacggcgtt
atccgtctgattggtaacccggaaacgcgctaccgtgaagatccggtacgtatgctgcgc
gcggtacgttttgccgccaaattgggtatgcgcatcagcccggaaaccgcagaaccgatc
cctcgcctcgctaccctgctgaacgatatcccaccggcacgcctgtttgaagaatcgctt
aaactgctacaagcgggctacggttacgaaacctataagctgttgtgtgaatatcatctg
ttccagccgctgttcccgaccattacccgctacttcacggaaaatggcgacagcccgatg
gagcggatcattgaacaggtgctgaagaataccgatacgcgtatccataacgatatgcgc
gtgaacccggcgttcttgtttgccgccatgttctggtacccactgctggagacggcacag
aagatcgcccaggaaagcggcctgacctatcacgacgctttcgcgctggcgatgaacgac
gtgctggacgaagcctgccgttcactggcaatcccgaaacgtctgacgacgttaacccgc
gatatctggcagttgcagttgcgtatgtcccgtcgtcagggtaaacgcgcatggaaactg
ctggagcatcctaagttccgtgcggcttatgacctgttggccttgcgagctgaagttgaa
cgtaatgctgaactgcagcgtctggtgaaatggtggggtgagttccaggtttccgcacca
ccagatcaaaaagggatgcttaacgagctggatgaagaaccgtcaccgcgtcgtcgtact
cgtcgtccacgcaaacgcgcaccgcgtcgtgagggtaccacatga
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