Shigella flexneri NCTC1 (serotype 2a): NCTC1_00212
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Entry
NCTC1_00212 CDS
T03751
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon,DNA polymerase III subunit epsilon,DNA polymerase III subunit epsilon,exonuclease, DNA polymerase III, epsilon subunit family,Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft03030
DNA replication
sft03430
Mismatch repair
sft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC1_00212 (dnaQ)
03430 Mismatch repair
NCTC1_00212 (dnaQ)
03440 Homologous recombination
NCTC1_00212 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sft03032
]
NCTC1_00212 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sft03400
]
NCTC1_00212 (dnaQ)
Enzymes [BR:
sft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC1_00212 (dnaQ)
DNA replication proteins [BR:
sft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC1_00212 (dnaQ)
DNA repair and recombination proteins [BR:
sft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC1_00212 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
CDX05500
UniProt:
A0A8B6WVQ9
LinkDB
All DBs
Position
1:228090..228830
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AA seq
246 aa
AA seq
DB search
MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRL
VDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRD
IPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLA
MTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEELAAHEARLDLVQKKGG
SCLWRA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctatgagcactgcaattacacgccagatcgttctcgataccgaaaccaccggt
atgaaccagattggtgcacactatgaaggccacaagatcattgagattggtgctgttgaa
gtagtgaaccgtcgcctgacgggcaataacttccatgtttatctcaaacccgatcggctg
gtggatccggaagcctttggcgtacatggtattgctgatgaatttttgctcgataagccc
acgtttgccgaagtagccgatgagtttatggactatatccgcggcgcggagttggtgatc
cataacgcagcgttcgatataggctttatggactacgagttttcgttgcttaagcgcgat
attccgaagaccaataccttctgtaaggtcaccgatagccttgcggtggcgaggaaaatg
tttcccggtaaacgcaacagcctcgatgcgctatgtgcccgctacgaaatagataacagt
aaacgaacgctgcacggggcattactcgatgcccagatccttgcggaagtttatctggcg
atgaccggtggtcaaacgtcgatggcttttgcgatggaaggagagacacagcagcaacaa
ggtgaagcaacaattcagcgcattgtacgtcaggcaagtaagttacgcgttgtttttgcg
acagatgaagagctggcagcacatgaagcccgtctcgatctggtgcagaaaaaaggcgga
agctgcctctggcgggcataa
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