Shigella flexneri NCTC1 (serotype 2a): NCTC1_00446
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Entry
NCTC1_00446 CDS
T03751
Symbol
ybbI
Name
(GenBank) DNA-binding transcriptional regulator CueR,Copper export regulator,DNA-binding transcriptional regulator CueR,Transcriptional regulator, effector-binding domain/component,Cu(I)-responsive transcriptional regulator,MerR, DNA binding
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sft03000
]
NCTC1_00446 (ybbI)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sft01504
]
NCTC1_00446 (ybbI)
Transcription factors [BR:
sft03000
]
Prokaryotic type
Helix-turn-helix
MerR family
NCTC1_00446 (ybbI)
Antimicrobial resistance genes [BR:
sft01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
NCTC1_00446 (ybbI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
DUF1836
Phytochelatin
Motif
Other DBs
NCBI-ProteinID:
CDX05723
UniProt:
A0A3T2UV79
LinkDB
All DBs
Position
1:449363..449770
Genome browser
AA seq
135 aa
AA seq
DB search
MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNL
EESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDSADC
PIIENLSGCCHHRAG
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcagcgatgtagcaaaaattaccggcctgaccagcaaagccattcgcttctat
gaagagaaggggctggtgacgccgccgatgcgcagcgaaaacggttatcgcacctacacg
cagcagcatctcaacgaactgaccttactgcgccaggcacggcaggtgggctttaacctg
gaagagagcggcgagctggtgaatctgtttaacgacccgcagcggcacagcgccgacgtc
aaacggcgcacgctggagaaggtggcggagatcgaacgacacattgaggagctgcaatcc
atgcgcgaccagctgctggcactggcgaatgcctgccctggcgatgacagcgccgactgc
ccgattatcgaaaatctctccggctgctgtcatcatcgggcagggtga
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