Shigella flexneri NCTC1 (serotype 2a): NCTC1_00963
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Entry
NCTC1_00963 CDS
T03751
Symbol
ompF
Name
(GenBank) outer membrane protein F,Porin OmpF,outer membrane protein F,Outer membrane protein (porin),Gram-negative porin
KO
K09476
outer membrane pore protein F
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft01501
beta-Lactam resistance
sft02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC1_00963 (ompF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC1_00963 (ompF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sft02000
]
NCTC1_00963 (ompF)
01504 Antimicrobial resistance genes [BR:
sft01504
]
NCTC1_00963 (ompF)
Transporters [BR:
sft02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC1_00963 (ompF)
Antimicrobial resistance genes [BR:
sft01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
NCTC1_00963 (ompF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-ProteinID:
CDX06211
UniProt:
A0A9P2IYN7
LinkDB
All DBs
Position
1:complement(930637..931725)
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AA seq
362 aa
AA seq
DB search
MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKTVGLHYFSKGNGENSYGGNGDM
TYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDY
GRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYL
GKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGL
KYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKS
KAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVY
QF
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgcaatattctggcagtgatcgtccctgctctgttagtagcaggtactgca
aacgctgcagaaatctataacaaagatggcaacaaagtagatctgtacggtaaaactgtt
ggtctgcattatttttccaagggtaacggtgaaaacagttacggtggcaatggcgacatg
acctatgcccgtcttggttttaaaggggaaactcaaatcaattccgatctgaccggttat
ggtcagtgggaatataacttccagggtaacaactctgaaggcgctgacgctcaaactggt
aacaaaacgcgtctggcattcgcgggtcttaaatacgctgacgttggttctttcgattac
ggccgtaactacggtgtggtttatgatgcactgggttacaccgatatgctgccagaattt
ggtggtgatactgcatacagcgatgacttcttcgttggtcgtgttggcggcgttgctacc
tatcgtaactccaacttctttggtctggttgatggcctgaacttcgctgttcagtacctg
ggtaaaaacgagcgtgacactgcacgccgttctaacggcgacggtgttggcggttctatc
agctacgaatacgaaggctttggtatcgttggtgcttatggtgcagctgaccgtaccaac
ctgcaagaagctcaacctcttggcaacggtaaaaaagctgaacagtgggctactggtctg
aagtacgacgcgaacaacatctacctggcagcgaactacggtgaaacccgtaacgctacg
ccgatcactaataaatttacaaacaccagcggcttcgccaacaaaacgcaagacgttctg
ttagttgcgcaataccagttcgatttcggtctgcgtccgtccatcgcttacaccaaatct
aaagcgaaagacgtagaaggtatcggtgatgttgatctggtgaactactttgaagtgggc
gcaacctactacttcaacaaaaacatgtccacctatgttgactacatcatcaaccagatc
gattctgacaacaaactgggcgtaggttcagacgacaccgttgctgtgggtatcgtttac
cagttctaa
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