Shigella flexneri NCTC1 (serotype 2a): NCTC1_01499
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Entry
NCTC1_01499 CDS
T03751
Symbol
kdgR
Name
(GenBank) transcriptional regulator KdgR,Transcriptional regulator kdgR,DNA-binding transcriptional regulator KdgR,beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family,Bacterial transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sft03000
]
NCTC1_01499 (kdgR)
Transcription factors [BR:
sft03000
]
Prokaryotic type
Helix-turn-helix
IclR family
NCTC1_01499 (kdgR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_24
HVO_A0261_N
HTH_5
HTH_11
TrmB
MarR_2
HTH_26
Fe_dep_repress
HTH_45
Mga
HVO_A0114
Rrf2
FUR
HTH_6
MarR
PadR
HTH_34
HTH_AsnC-type
Dimerisation2-like_dom
DUF6549
Motif
Other DBs
NCBI-ProteinID:
CDX06724
UniProt:
Q7UCL4
LinkDB
All DBs
Position
1:1401630..1402421
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AA seq
263 aa
AA seq
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MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKTLGY
VAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISRLTKETIHLGALDEDSIVY
IHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEVKQILEGVEYKRSTERTITST
EALLPVLDQVREQGYGEDNEEQEEGLQCIAVPVFDRFGVVIAGLSISFPTLRFSEERLQE
YVAMLHTAARKISAQMGYHDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcagatctggataaacagcctgattctgtatcttccgtgctaaaagttttt
ggcattttgcaggcgctgggtgaagagcgcgaaatagggataaccgagctgtcgcagcgc
gtcatgatgtcaaaaagcaccgtttatcgctttttacagaccatgaaaaccttaggttat
gtggcgcaggaaggggagtcggagaaatattccctgaccctgaaattgtttgaactgggc
gctcgcgcgttacaaaacgtcgatttaattcgtagcgcagatatccagatgcgtgagatc
tcccgcctgaccaaagaaactatccacctcggcgcactggacgaagacagtattgtttac
attcacaaaattgactctatgtacaatttgcgcatgtattcacggattgggcgtcgtaat
ccgctgtacagcaccgcgattggtaaggtactgctggcatggcgcgatcgcgatgaagtg
aagcaaattcttgagggcgtggagtataaacgcagtaccgagcggaccatcaccagtaca
gaagcgttattacccgttctggaccaggtgcgcgagcaggggtatggagaagataacgaa
gagcaggaagaagggctgcaatgcattgcggtaccggtatttgatcgctttggcgtggtc
attgccggtttgagcatctccttcccgacgttgcgtttctctgaagagcgtttacaggaa
tatgtcgcaatgttgcataccgcagcgcgcaaaatttctgcccaaatgggttatcacgac
tatccgttctga
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