Shigella flexneri NCTC1 (serotype 2a): NCTC1_01898
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Entry
NCTC1_01898 CDS
T03751
Symbol
ompD_1
Name
(GenBank) putative outer membrane porin protein,Outer membrane porin protein OmpD precursor,outer membrane porin protein C,Outer membrane protein (porin),Gram-negative porin
KO
K16076
outer membrane porin protein LC
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sft02000
]
NCTC1_01898 (ompD_1)
Transporters [BR:
sft02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC1_01898 (ompD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
CDX07108
UniProt:
Q7UAG6
LinkDB
All DBs
Position
1:1757802..1758902
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AA seq
366 aa
AA seq
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MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLG
FKGETQINDQMIGFGHWEYDFKGYNDEANGSRGNKTRLAYAGLKISEFGSLDYGRNYGVG
YDIGSWTDMLPEFGGDTWSQKDVFMTYRTTGLATYRNYDFFGLIEGLNFAAQYQGKNKRT
DNSHLYGADDTRANGDGFGISSTYVYDGFGIGAVYTKSDRTNAQERAAANPLNASGKNAE
LWATGIKYDANNIYFAANYDETLNMTTYGDGYISNKAQSFEVVAQYQFDFGLRPSLAYLK
SKGRDLGRYADQDMIEYIDVGATYFFNKNMSTYVDYKINLIDESDFTRAVDIRTDNIVAT
GITYQF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaatagttgcggtggttgtaactggtttgttagctgcgaacgtagcacac
gctgccgaagtctataacaaggatggtaataaactcgacctttatggcaaggttaccgct
ctacgttattttactgatgataagcgtgacgatggtgataaaacttatgcccgtctcggc
tttaaaggagaaacgcaaatcaatgatcaaatgattggttttggtcactgggaatatgat
tttaaaggctataacgatgaagccaacggctcgcgcggcaacaagacccgtctggcctat
gctggtttaaaaattagtgaatttggctctctggactatggtcgtaactacggtgtcggc
tacgacattggttcatggaccgatatgttgccagaatttggtggcgatacctggagtcag
aaagatgtcttcatgacataccgtaccaccggtctagcaacctatcgcaactacgatttc
tttggcttaattgaagggctgaactttgccgcgcaatatcaaggcaaaaataaacgtact
gacaacagtcatctttatggtgctgacgacacgcgtgccaacggtgacggtttcggtatc
tcctcaacttatgtttatgatggctttggtatcggtgcggtatataccaaatccgatcgg
acaaatgcgcaggaaagagccgcagctaatcctctcaatgcctccggtaagaatgcagaa
ctatgggccacaggtataaagtatgatgccaacaacatctactttgcagctaattacgat
gaaacattaaacatgaccacctatggggatggttatatctctaacaaagcacaaagtttt
gaagtggtggcgcaatatcaattcgacttcggcttgcgcccatcactcgcttacctgaaa
tcgaaaggcagagatctgggccgctacgccgaccaggacatgattgagtatatcgacgtt
ggtgcgacgtatttcttcaacaaaaatatgtcgacctatgttgattataaaatcaacctg
attgatgaaagcgactttacccgtgccgtagatattcgcaccgataacatcgtcgctacg
ggcattacctatcagttctaa
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