Shigella flexneri NCTC1 (serotype 2a): NCTC1_02309
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Entry
NCTC1_02309 CDS
T03751
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase,dTDP-4-dehydrorhamnose 3,5-epimerase,dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00521
Streptomycin biosynthesis
sft00523
Polyketide sugar unit biosynthesis
sft00541
Biosynthesis of various nucleotide sugars
sft01100
Metabolic pathways
sft01110
Biosynthesis of secondary metabolites
sft01250
Biosynthesis of nucleotide sugars
Module
sft_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC1_02309 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC1_02309 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC1_02309 (rfbC)
Enzymes [BR:
sft01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCTC1_02309 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CDX07486
UniProt:
A0A8B6WYF0
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Position
1:complement(2082371..2082916)
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AA seq
181 aa
AA seq
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MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKSTKGVLRG
LHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHG
FCVLSDEAEFVYKTNNFYSKMQERGILWSDKSINIEWPVQNPLLSDKDINGQKFVDADYF
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattaaaactgaaattcctgatgtgctaatttttgaaccaaaagtatttggt
gatgagcggggcttttttatggaaagcttcaatcagaaagttttcgaagaggctgtagga
cgaaaggttgagtttgttcaggataaccattctaaatcaactaagggtgtgttacgcgga
ctgcactatcagctggaaccttatgctcaaggaaaactggtacgctgtgttgtcggtgaa
gtttttgacgtagctgttgatattcggaaatcatcaccaacatttggcaagtgggttggt
gtaaatttgtcggcggagaataagcgtcaattatggataccggaaggattcgctcatggg
ttttgcgttcttagtgatgaagcagaatttgtctacaaaacaaataatttctattcaaaa
atgcaagagcgtgggattttatggagcgacaaaagtataaatatagaatggccggttcaa
aatccattgctttctgataaagatattaatggtcaaaaatttgtagatgctgattatttt
atatga
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