Shigella flexneri NCTC1 (serotype 2a): NCTC1_02345
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Entry
NCTC1_02345 CDS
T03751
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase,DNA-3-methyladenine glycosylase 2,3-methyl-adenine DNA glycosylase II,3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase,AlkA N-terminal domain
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC1_02345 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sft03400
]
NCTC1_02345 (alkA)
Enzymes [BR:
sft01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NCTC1_02345 (alkA)
DNA repair and recombination proteins [BR:
sft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC1_02345 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CDX07520
UniProt:
A0AB33SGT4
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All DBs
Position
1:complement(2120824..2121672)
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AA seq
282 aa
AA seq
DB search
MYILNWQPPYDWSWMLGFLAARAVSGVETVADSYYARSLAVGEYRGVVTAIPDIARHTLH
INLSEGLEPVAAECLAKMSRLLDLQCNPQIVNGALGKLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFLGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagtggtgtggaaacggtcgcggacagttattatgcccgtagtctggca
gtgggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgaaggtttagaacccgttgccgctgagtgtctggcgaaaatgagccgc
ctgcttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggcccggattgcgtttacccggcagtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccagagtggcacag
ctttatggcgaacggctggatgattttccggagtatatctgcttccccacgcctcagcgg
ctggcagcagccgacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gatgtggagcaggcgatgaaaacgctgcaaacttttccgggtatcgggcgctggacggcg
aattatttcgccttgcgcggctggcaggcgaaagatgtttttctgccggatgattatctg
attaaacagcgatttctggggatgacaccggcacaaatccgccgttatgccgagcgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga
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