Shigella flexneri NCTC1 (serotype 2a): NCTC1_02355
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Entry
NCTC1_02355 CDS
T03751
Symbol
mdtB_1
Name
(GenBank) multidrug efflux system subunit MdtB,Multidrug transporter MdtC,multidrug efflux system subunit MdtB,RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family,AcrB/AcrD/AcrF family
KO
K07788
multidrug efflux pump
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC1_02355 (mdtB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sft02000
]
NCTC1_02355 (mdtB_1)
Transporters [BR:
sft02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NCTC1_02355 (mdtB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
CDX07530
UniProt:
A0AB33SF36
LinkDB
All DBs
Position
1:2129208..2131766
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AA seq
852 aa
AA seq
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MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLY
PGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLNVAEQEVQAA
INAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISG
VGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSA
NDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGA
NIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYL
FLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENIS
RYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAI
LISAVVSLTLTPMMCARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTL
SVALSTLLLSVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDP
AVQSLTSFVGVDGTNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQP
TQDLTIDTQVSRTQYQFTLQATSLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYV
NVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTI
RLTSSDGGVVPLSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEK
TLNLPVDITTQF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgttacccccgagcagcacaggcggcccgtcgcgcctgtttattatgcgtcct
gtcgccaccacgctgctgatggtggcgatcttactcgccgggattatcggttatcgcgcc
ctgcccgtttcggcgctgccggaagtggactatccgaccattcaggtggtcacgctctac
ccaggtgccagcccggatgtcatgacctctgccgttaccgcgccgctcgaacgccagttc
gggcagatgtctggcctgaaacagatgtcgtcgcaaagttccggcggtgcgtcagttatc
actttgcagttccagctaacattaccgctcaatgtcgccgagcaggaagtgcaggccgcg
attaacgctgcgaccaacttgttgccgagcgatctgcctaacccgccggtttacagcaaa
gtgaacccggcagatccgccgatcatgacgctcgccgtcacctcaaccgccatgccgatg
acgcaagtggaagatatggtggaaacccgcgtcgcgcagaaaatctcgcagatttccggc
gtcggcctggtgacgctttccggcggtcagcgtccggctgttcgcgtcaaacttaacgct
caggcgattgccgccctcggcctgaccagcgaaaccgtgcgcaccgccattaccggcgct
aacgttaactcggcaaaaggtagcctcgacggcccttcccgtgcggtcacgctttccgcg
aacgaccagatgcaatccgccgaagagtatcgccagctaatcatcgcctaccagaacggc
gcgccaattcgtctgggcgatgtcgcaactgtagagcaaggtgcagaaaacagctggctc
ggcgcgtgggcgaacaaagaacaggccattgtgatgaatgttcagcgccagcccggtgct
aacattatctccaccgccgacagcattcggcagatgctgccacagctcactgagagtctg
ccgaaatcggtgaaggtgacagtgctttccgatcgcaccaccaatatccgcgcatccgtc
gatgatactcagtttgaattgatgatggctatcgcgctggtagtcatgattatctacctg
tttttgcgcaatattccggcgaccatcattcccggtgttgctgtaccgctgtcgttaatc
ggcactttcgcggttatggtgtttctcgatttttcaatcaataacctgacactgatggct
ttaactatcgccaccggattcgtggtcgatgacgccatcgtggtgatcgaaaacatttcc
cgctatatcgaaaaaggcgaaaaaccgttggcggcggcgctcaagggcgcaggtgaaatc
ggctttaccattatctcgctgaccttctcactgattgcggtgttgatcccactgctgttt
atgggcgatatcgtcgggcgactgttccgcgaatttgctattaccctggcggtagcgatt
ttgatctcagcggtggtgtcgctgaccctgacaccgatgatgtgcgcgcggatgctcagc
caggagtcgttgcgtaaacagaaccgcttctcccgtgcctcggaaaaaatgttcgacagg
ataatcgccgcctatggtcgtggactggcgaaagtgctgaatcatccgtggctgacctta
agcgtggcactcagcacgctgctgcttagcgtgctgctgtgggtgttcattccgaaaggt
ttcttcccggtacaggacaacggcattattcagggcactttgcaggcaccgcaatccagc
tcctttgccaatatggcccagcgacaacgccaggtcgcggacgtgattttgcaggatccg
gcagtgcaaagcctgacctcatttgttggcgttgatggcactaacccgtcgctgaatagt
gcacgtttacaaatcaacctcaaaccgttggatgaacgtgatgatcgggtgcaaaaagtc
atcgcccgtctgcaaacggcggtagataaagtgccgggcgtcgatctcttcctgcaacca
acgcaggacctgaccatcgatactcaggtcagccgcacccagtaccagtttaccttgcag
gccacgtcactggatgcgctcagtacctgggtgccacagttgatggaaaaactccagcaa
ctgccacagctttctgatgtctccagcgactggcaggacaaagggctggtggcgtatgtc
aatgttgatcgcgacagcgccagccgtctggggatcagcatggcggacgtcgataacgcc
ctgtacaacgcgtttggtcagcgactgatttccactatttatactcaggctaaccagtat
cgcgtggtgctggagcacaataccgaaaataccccaggcctcgcggcgctggataccatt
cgcctgaccagcagcgacggtggcgtggtgccgttaagctcaattgccaaaattgagcag
cgttttgcgccgctttccatcaaccatctggatcagttcccggtaacaaccatctccttt
aacgtgccggataactattcgctgggcgatgcggtgcaggcgattatggacaccgaaaag
acgctgaatctgccggtggatatcaccacgcaattctag
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